RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 NAPGQ99747 312 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-212ENST00000573126 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.39
RPAIN-212ENST00000573126 NKRFO15226 690 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPAIN-212ENST00000573126 KLK7P49862 253 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 NEK8Q86SG6 692 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 CEP112Q8N8E3 955 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 ZNF507Q8TCN5 953 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 DUSP9Q99956 384 aaKnown RBP12.58□□□□□ -0.4
RPAIN-212ENST00000573126 LZTS2Q9BRK4 669 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 TUBGCP2Q9BSJ2 902 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 AGPAT5Q9NUQ2 364 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 TMEM260Q9NX78 707 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-212ENST00000573126 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 MYL1P05976 194 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 RHOXF2BP0C7M4 288 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 TRIM21P19474 475 aaKnown RBP12.58□□□□□ -0.4
RPAIN-212ENST00000573126 GNA11P29992 359 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
RPAIN-212ENST00000573126 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 CLEC10AQ8IUN9 316 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 PNKPQ96T60 521 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 RHOXF2Q9BQY4 288 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 FUT8Q9BYC5 575 aa12.58□□□□□ -0.4
RPAIN-212ENST00000573126 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 ENC1O14682 589 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 TXKP42681 527 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 NT5C2P49902 561 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 RHBDL3P58872 404 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 LONRF2Q1L5Z9 754 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 WDR59Q6PJI9 974 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 REXO1Q8N1G1 1221 aaKnown RBP12.57□□□□□ -0.4
RPAIN-212ENST00000573126 CCDC151A5D8V7 595 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
RPAIN-212ENST00000573126 NCAPH2Q6IBW4 605 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 AK8Q96MA6 479 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
RPAIN-212ENST00000573126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 A0A1W2PQC6 194 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 OAS2P29728 719 aaKnown RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 TBC1D8BQ0IIM8 1120 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 PICALMQ13492 652 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 P2RX5Q93086 422 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 COA7Q96BR5 231 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 CNOT6LQ96LI5 555 aaKnown RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 CAPN11Q9UMQ6 739 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 ATP8B1O43520 1251 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 DNM2P50570 870 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-212ENST00000573126 CUEDC2Q9H467 287 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 SUGCTQ9HAC7 445 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 HDAC6Q9UBN7 1215 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 BTAF1O14981 1849 aa12.56□□□□□ -0.4
RPAIN-212ENST00000573126 CTAGE15A4D2H0 777 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 F8W031 263 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-212ENST00000573126 CTAGE8P0CG41 777 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 SRGNP10124 158 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 ERCC3P19447 782 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 CCNE1P24864 410 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
RPAIN-212ENST00000573126 CCDC122Q5T0U0 273 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 CTAGE6Q86UF2 777 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 CTAGE4Q8IX94 777 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
RPAIN-212ENST00000573126 KIAA0895Q8NCT3 520 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 LRRC4BQ9NT99 713 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 POLLQ9UGP5 575 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 SBF2Q86WG5 1849 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 RASSF10A6NK89 507 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 ZBTB22O15209 634 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 PDHBP11177 359 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 HERVK_113P62684 666 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 MCM6Q14566 821 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 CCDC47Q96A33 483 aaKnown RBP12.55□□□□□ -0.4
RPAIN-212ENST00000573126 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
RPAIN-212ENST00000573126 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-212ENST00000573126 USP21Q9UK80 565 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 MYO6Q9UM54 1294 aa12.55□□□□□ -0.4
RPAIN-212ENST00000573126 BICDL2A1A5D9 508 aa12.54□□□□□ -0.4
RPAIN-212ENST00000573126 POTEMA6NI47 508 aa12.54□□□□□ -0.4
RPAIN-212ENST00000573126 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms