RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 KIAA0355O15063 1070 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 CLTBP09497 229 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 C6orf222P0C671 652 aaPredicted RBP13.38□□□□□ -0.27
LITAF-206ENST00000571277 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 PCP11498 1178 aaKnown RBP13.38□□□□□ -0.27
LITAF-206ENST00000571277 FAAP100Q0VG06 881 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 MFSD6Q6ZSS7 791 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 TTC14Q96N46 770 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 TOX2Q96NM4 488 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 ELP1O95163 1332 aa13.38□□□□□ -0.27
LITAF-206ENST00000571277 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
LITAF-206ENST00000571277 ASB14A6NK59 587 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 PQBP1O60828 265 aaKnown RBP13.37□□□□□ -0.27
LITAF-206ENST00000571277 ASGR1P07306 291 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 PTGS1P23219 599 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 CDK7P50613 346 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 EPHB4P54760 987 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
LITAF-206ENST00000571277 ZNF543Q08ER8 600 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
LITAF-206ENST00000571277 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 PURBQ96QR8 312 aaKnown RBP13.37□□□□□ -0.27
LITAF-206ENST00000571277 IL25Q9H293 177 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
LITAF-206ENST00000571277 GNEQ9Y223 722 aaKnown RBP13.37□□□□□ -0.27
LITAF-206ENST00000571277 NFIBO00712 420 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 TNFAIP2Q03169 654 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 TMEM63BQ5T3F8 832 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
LITAF-206ENST00000571277 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 PCSK9Q8NBP7 692 aaKnown RBP13.36□□□□□ -0.27
LITAF-206ENST00000571277 CLEC4DQ8WXI8 215 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 ESR2Q92731 530 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
LITAF-206ENST00000571277 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
LITAF-206ENST00000571277 CDH23Q9H251 3354 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 DCDC2CA8MYV0 355 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 ZNF213O14771 459 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 SMPD1P17405 629 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 PDE4AP27815 886 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 BEX3Q00994 111 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
LITAF-206ENST00000571277 NSMFQ6X4W1 530 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 DGKHQ86XP1 1220 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 ZKSCAN3Q9BRR0 538 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 SPC25Q9HBM1 224 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 PDGFCQ9NRA1 345 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
LITAF-206ENST00000571277 HIP1O00291 1037 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 KDM4AO75164 1064 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 RAG1P15918 1043 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 TLK2Q86UE8 772 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 FBXO16Q8IX29 292 aaPredicted RBP13.34□□□□□ -0.27
LITAF-206ENST00000571277 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
LITAF-206ENST00000571277 WDR19Q8NEZ3 1342 aa13.34□□□□□ -0.27
LITAF-206ENST00000571277 A0A0U1RQG5 324 aaPredicted RBP13.33□□□□□ -0.28
LITAF-206ENST00000571277 ARVCFO00192 962 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
LITAF-206ENST00000571277 NT5C2P49902 561 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 ALDH5A1P51649 535 aaPredicted RBP13.33□□□□□ -0.28
LITAF-206ENST00000571277 IQSEC1Q6DN90 963 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 EEPD1Q7L9B9 569 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 FAM126BQ8IXS8 530 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 SLC43A3Q8NBI5 491 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 GUCD1Q96NT3 240 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 VTA1Q9NP79 307 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
LITAF-206ENST00000571277 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 B4E1Z4 1266 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 TIMP1P01033 207 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 CD4P01730 458 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 GOLGA8HP0CJ92 632 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 FPGSQ05932 587 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 PWP2Q15269 919 aaKnown RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 GPATCH4Q5T3I0 446 aaKnown RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 ENAHQ8N8S7 591 aaPredicted RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 ZSCAN10Q96SZ4 725 aaPredicted RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
LITAF-206ENST00000571277 Q9Y3F1 56 aa13.32□□□□□ -0.28
LITAF-206ENST00000571277 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
LITAF-206ENST00000571277 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms