RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ATRNO75882 1429 aa6.99□□□□□ -1.29
KARSP3-201ENST00000571212 SHISA3A0PJX4 238 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 ERCC3P19447 782 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 MPP2Q14168 576 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 PKN1Q16512 942 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 FAM196AQ6ZSG2 479 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 PHACTR4Q8IZ21 702 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 RNF141Q8WVD5 230 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 SLC38A3Q99624 504 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 BCL2L13Q9BXK5 485 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 DUSP13Q9UII6 198 aa6.98□□□□□ -1.29
KARSP3-201ENST00000571212 MYOM2P54296 1465 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 ZBTB7CA1YPR0 619 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 DBX1A6NMT0 343 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 EGR3Q06889 387 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 TSPYL5Q86VY4 417 aaPredicted RBP6.97□□□□□ -1.29
KARSP3-201ENST00000571212 ABHD4Q8TB40 342 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 CCDC74BQ96LY2 380 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 TRIT1Q9H3H1 467 aaKnown RBP6.97□□□□□ -1.29
KARSP3-201ENST00000571212 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 GPATCH2Q9NW75 528 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 KCNH3Q9ULD8 1083 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 PCDHA11Q9Y5I1 949 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 CDC42BPGQ6DT37 1551 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 NPHP3Q7Z494 1330 aa6.97□□□□□ -1.29
KARSP3-201ENST00000571212 CRKP46108 304 aa6.96□□□□□ -1.29
KARSP3-201ENST00000571212 PCDHB14Q9Y5E9 798 aa6.96□□□□□ -1.29
KARSP3-201ENST00000571212 PXDNQ92626 1479 aa6.96□□□□□ -1.3
KARSP3-201ENST00000571212 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.96□□□□□ -1.3
KARSP3-201ENST00000571212 SLC22A31A6NKX4 558 aa6.96□□□□□ -1.3
KARSP3-201ENST00000571212 EIF4A3P38919 411 aaKnown RBP6.96□□□□□ -1.3
KARSP3-201ENST00000571212 ARSHQ5FYA8 562 aa6.96□□□□□ -1.3
KARSP3-201ENST00000571212 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
KARSP3-201ENST00000571212 MYLIPQ8WY64 445 aa6.96□□□□□ -1.3
KARSP3-201ENST00000571212 CCDC120Q96HB5 630 aa6.96□□□□□ -1.3
KARSP3-201ENST00000571212 NSUN3Q9H649 340 aaKnown RBP6.96□□□□□ -1.3
KARSP3-201ENST00000571212 SP110Q9HB58 689 aa6.96□□□□□ -1.3
KARSP3-201ENST00000571212 LRPPRCP42704 1394 aaKnown RBP6.95□□□□□ -1.3
KARSP3-201ENST00000571212 BCL9LQ86UU0 1499 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 GREM1O60565 184 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 HPXP02790 462 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 GBP1P32455 592 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 MRPL58Q14197 206 aaKnown RBP6.95□□□□□ -1.3
KARSP3-201ENST00000571212 ZNF296Q8WUU4 475 aaPredicted RBP6.95□□□□□ -1.3
KARSP3-201ENST00000571212 VWCEQ96DN2 955 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 EBF1Q9UH73 591 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 RAB3GAP2Q9H2M9 1393 aa6.95□□□□□ -1.3
KARSP3-201ENST00000571212 TECPR2O15040 1411 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 KNDC1Q76NI1 1749 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 UBOX5O94941 541 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 ZGLP1P0C6A0 271 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 RAC2P15153 192 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
KARSP3-201ENST00000571212 TIGD5Q53EQ6 642 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 ADAMTS1Q9UHI8 967 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 GGT7Q9UJ14 662 aa6.94□□□□□ -1.3
KARSP3-201ENST00000571212 IFT172Q9UG01 1749 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 KRT1P04264 644 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 CWF19L2Q2TBE0 894 aaKnown RBP6.93□□□□□ -1.3
KARSP3-201ENST00000571212 CILP2Q8IUL8 1156 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 SUPT16HQ9Y5B9 1047 aaKnown RBP6.93□□□□□ -1.3
KARSP3-201ENST00000571212 KIF1AQ12756 1690 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 BRWD3Q6RI45 1802 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 FMN2Q9NZ56 1722 aa6.93□□□□□ -1.3
KARSP3-201ENST00000571212 ABCC11Q96J66 1382 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 RGS13O14921 159 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 C1QTNF9P0C862 333 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 SEZ6Q53EL9 994 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 UNC5CLQ8IV45 518 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 ASPNQ9BXN1 380 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 RNF32Q9H0A6 362 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 SLIT2O94813 1529 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 SPATA31A3Q5VYP0 1347 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 ADGRF5Q8IZF2 1346 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 GLI3P10071 1580 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 EP400Q96L91 3159 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 RALGAPBQ86X10 1494 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 ANKRD30BQ9BXX2 1392 aa6.92□□□□□ -1.3
KARSP3-201ENST00000571212 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 RAG1P15918 1043 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 RAP1GAPP47736 663 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 GALK1P51570 392 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 CLCQ05315 142 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 ANTXR1Q9H6X2 564 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 DCP1AQ9NPI6 582 aaPredicted RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 RGPD8O14715 1765 aaPredicted RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 CCDC144AA2RUR9 1427 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 BLMP54132 1417 aaPredicted RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 NWD2Q9ULI1 1742 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 USP32Q8NFA0 1604 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 TEKQ02763 1124 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 SNW1Q13573 536 aaKnown RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 CLEC16AQ2KHT3 1053 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 OVOS1Q6IE37 1185 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms