RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
SPNS2-202ENST00000570641 MYSM1Q5VVJ2 828 aa20.74■□□□□ 0.91
SPNS2-202ENST00000570641 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
SPNS2-202ENST00000570641 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
SPNS2-202ENST00000570641 TNFRSF25Q93038 417 aa20.74■□□□□ 0.91
SPNS2-202ENST00000570641 ASCC2Q9H1I8 757 aaPredicted RBP20.74■□□□□ 0.91
SPNS2-202ENST00000570641 PSTPIP2Q9H939 334 aa20.74■□□□□ 0.91
SPNS2-202ENST00000570641 RAVER2Q9HCJ3 691 aaKnown RBP20.74■□□□□ 0.91
SPNS2-202ENST00000570641 ZNF536O15090 1300 aa20.74■□□□□ 0.91
SPNS2-202ENST00000570641 SLC10A3P09131 477 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 KRT85P78386 507 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 MCTP2Q6DN12 878 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 FAM173BQ6P4H8 233 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 LBX2Q6XYB7 198 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 KRT25Q7Z3Z0 450 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 ANKRD23Q86SG2 305 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 CPXCR1Q8N123 301 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 REXO1Q8N1G1 1221 aaKnown RBP20.73■□□□□ 0.91
SPNS2-202ENST00000570641 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 CCDC102AQ96A19 550 aa20.73■□□□□ 0.91
SPNS2-202ENST00000570641 CCDC194A0A1B0GVG4 234 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 MANSC4A6NHS7 340 aaPredicted RBP20.72■□□□□ 0.91
SPNS2-202ENST00000570641 GOLGA6L22H0YM25 854 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 M0R2N6 131 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 ATP2A1O14983 1001 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 DNM1Q05193 864 aaKnown RBP20.72■□□□□ 0.91
SPNS2-202ENST00000570641 COL13A1Q5TAT6 717 aaPredicted RBP20.72■□□□□ 0.91
SPNS2-202ENST00000570641 GTF3C2Q8WUA4 911 aaPredicted RBP20.72■□□□□ 0.91
SPNS2-202ENST00000570641 BRI3BPQ8WY22 251 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 AGBL1Q96MI9 1066 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 P2RX7Q99572 595 aaKnown RBP20.72■□□□□ 0.91
SPNS2-202ENST00000570641 CFAP45Q9UL16 551 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
SPNS2-202ENST00000570641 PCDHA6Q9UN73 950 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 PCDHA8Q9Y5H6 950 aa20.72■□□□□ 0.91
SPNS2-202ENST00000570641 CAPN15O75808 1086 aa20.71■□□□□ 0.91
SPNS2-202ENST00000570641 NCLP19338 710 aaKnown RBP20.71■□□□□ 0.91
SPNS2-202ENST00000570641 HERVK_113P62684 666 aa20.71■□□□□ 0.91
SPNS2-202ENST00000570641 TKFCQ3LXA3 575 aa20.71■□□□□ 0.91
SPNS2-202ENST00000570641 RILPL1Q5EBL4 403 aa20.71■□□□□ 0.91
SPNS2-202ENST00000570641 TESPA1A2RU30 521 aaPredicted RBP20.7■□□□□ 0.9
SPNS2-202ENST00000570641 BTBD19C9JJ37 291 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 ALAS1P13196 640 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 TMEM132BQ14DG7 1078 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 CSPP1Q1MSJ5 1256 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 PIK3AP1Q6ZUJ8 805 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 MCF2L2Q86YR7 1114 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 SAMD3Q8N6K7 520 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 RASGRP4Q8TDF6 673 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 TEX13BQ9BXU2 312 aa20.7■□□□□ 0.9
SPNS2-202ENST00000570641 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
SPNS2-202ENST00000570641 ZNF214Q9UL59 606 aaPredicted RBP20.7■□□□□ 0.9
SPNS2-202ENST00000570641 PDHXO00330 501 aa20.69■□□□□ 0.9
SPNS2-202ENST00000570641 ADAMTS3O15072 1205 aa20.69■□□□□ 0.9
SPNS2-202ENST00000570641 TAL1P17542 331 aaPredicted RBP20.69■□□□□ 0.9
SPNS2-202ENST00000570641 CLK2P49760 499 aaKnown RBP20.69■□□□□ 0.9
SPNS2-202ENST00000570641 INHBEP58166 350 aa20.69■□□□□ 0.9
SPNS2-202ENST00000570641 HTRA3P83110 453 aa20.69■□□□□ 0.9
SPNS2-202ENST00000570641 NONOQ15233 471 aaKnown RBP eCLIP20.69■□□□□ 0.9
SPNS2-202ENST00000570641 SNRNP48Q6IEG0 339 aaKnown RBP20.69■□□□□ 0.9
SPNS2-202ENST00000570641 SCAND2PQ9GZW5 306 aaPredicted RBP20.69■□□□□ 0.9
SPNS2-202ENST00000570641 TFIP11Q9UBB9 837 aaKnown RBP20.69■□□□□ 0.9
SPNS2-202ENST00000570641 CNPY2Q9Y2B0 182 aa20.69■□□□□ 0.9
SPNS2-202ENST00000570641 PIK3CDO00329 1044 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 OPLAHO14841 1288 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 FOSP01100 380 aaPredicted RBP20.68■□□□□ 0.9
SPNS2-202ENST00000570641 MCM4P33991 863 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 STAT3P40763 770 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 TRAPPC10P48553 1259 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 AP3B2Q13367 1082 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 UBE2SQ16763 222 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 JAKMIP3Q5VZ66 844 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 CHAMP1Q96JM3 812 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 TRERF1Q96PN7 1200 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 ZCCHC17Q9NP64 241 aaKnown RBP20.68■□□□□ 0.9
SPNS2-202ENST00000570641 RABGAP1Q9Y3P9 1069 aa20.68■□□□□ 0.9
SPNS2-202ENST00000570641 GCOM1H8Y6P7 765 aaPredicted RBP20.67■□□□□ 0.9
SPNS2-202ENST00000570641 MEIS2O14770 477 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 CFBP00751 764 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 POLR2MP0CAP2 368 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 PLS1Q14651 629 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 EARS2Q5JPH6 523 aaKnown RBP20.67■□□□□ 0.9
SPNS2-202ENST00000570641 USP28Q96RU2 1077 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 MAF1Q9H063 256 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 CREBZFQ9NS37 354 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 RNF146Q9NTX7 359 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 TMEM260Q9NX78 707 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 MAP3K20Q9NYL2 800 aaKnown RBP20.67■□□□□ 0.9
SPNS2-202ENST00000570641 RTEL1Q9NZ71 1219 aa20.67■□□□□ 0.9
SPNS2-202ENST00000570641 MYH7BA7E2Y1 1941 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 FAM205CA6NFA0 338 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 DDX11L8A8MPP1 907 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 FAM155AB1AL88 458 aaPredicted RBP20.66■□□□□ 0.9
SPNS2-202ENST00000570641 FIBPO43427 364 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 PTMSP20962 102 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 COPB2P35606 906 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 GHRHRQ02643 423 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
SPNS2-202ENST00000570641 NOM1Q5C9Z4 860 aaKnown RBP20.66■□□□□ 0.9
SPNS2-202ENST00000570641 ANO1Q5XXA6 986 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms