RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 NEK8Q86SG6 692 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 KLRG1Q96E93 195 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 KIAA1683Q9H0B3 1180 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 OPLAHO14841 1288 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 CCNT1O60563 726 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 PDILTQ8N807 584 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 L3MBTL3Q96JM7 780 aaPredicted RBP12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 PARP14Q460N5 1801 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 PTPRAP18433 802 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 SPP2Q13103 211 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-216ENST00000569715 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 DCPSQ96C86 337 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 MEIS2O14770 477 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 RANBP17Q9H2T7 1088 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 CTAGE5O15320 804 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 FOXN1O15353 648 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 POLR2DO15514 142 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 TDP2O95551 362 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 GINM1Q9NU53 330 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
PDXDC1-216ENST00000569715 WDR90Q96KV7 1748 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 USP2O75604 605 aaPredicted RBP12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 VCAM1P19320 739 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 EPHX2P34913 555 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 KRT26Q7Z3Y9 468 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 PICK1Q9NRD5 415 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 FEM1BQ9UK73 627 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 SLC37A4O43826 429 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 CDC25AP30304 524 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 ANO6Q4KMQ2 910 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■□□□□ 8.5
PDXDC1-216ENST00000569715 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 WDR46O15213 610 aaKnown RBP12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 SUPT20HL1Q3ZLR7 823 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
PDXDC1-216ENST00000569715 GLTPD2A6NH11 291 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 PP2D1A8MPX8 630 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 NEMFO60524 1076 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 PLA2G6O60733 806 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 PNOCQ13519 176 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 ARL6IP4Q66PJ3 421 aaKnown RBP12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 SASS6Q6UVJ0 657 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 FAM160B2Q86V87 743 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 GRAMD1CQ8IYS0 662 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 LPAR1Q92633 364 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 RLFQ13129 1914 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 WDR18Q9BV38 432 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 SCN4AP35499 1836 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 POTECB2RU33 542 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 HMGCS2P54868 508 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 BACE1P56817 501 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 ANO3Q9BYT9 981 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 RPAP3Q9H6T3 665 aaPredicted RBP12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 KIAA1468Q9P260 1216 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 PTPRFP10586 1907 aa12.42□□□□□ -0.42
PDXDC1-216ENST00000569715 OR52Z1P0C646 297 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 VGLL4Q14135 290 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 C11orf57Q6ZUT1 292 aaPredicted RBP12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 DHX58Q96C10 678 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 SLF1Q9BQI6 1058 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 SNCAIPQ9Y6H5 919 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 COL11A1P12107 1806 aaPredicted RBP12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 BIN1O00499 593 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 USP50Q70EL3 339 aaPredicted RBP12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 AGBL1Q96MI9 1066 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 ZNF536O15090 1300 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 NOL9Q5SY16 702 aaKnown RBP12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 DTHD1Q6ZMT9 781 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 WNK4Q96J92 1243 aa12.41□□□□□ -0.42
PDXDC1-216ENST00000569715 GRIN3BO60391 1043 aa12.4□□□□□ -0.42
PDXDC1-216ENST00000569715 FLOT1O75955 427 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms