RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 TSEN34Q9BSV6 310 aaKnown RBP16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 RWDD1Q9H446 243 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 PDGFCQ9NRA1 345 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
GTF3C1-211ENST00000569653 NFIBO00712 420 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 ICAM1P05362 532 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 CLTBP09497 229 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 C6orf222P0C671 652 aaPredicted RBP16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 PDHBP11177 359 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 PDE4AP27815 886 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 GJA9P57773 515 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 BEX3Q00994 111 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 AAMPQ13685 434 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 ANKRD33Q7Z3H0 272 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 GUCD1Q96NT3 240 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 PRKAG2Q9UGJ0 569 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 MYH6P13533 1939 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 CUL9Q8IWT3 2517 aa16.34■□□□□ 0.21
GTF3C1-211ENST00000569653 ASGR1P07306 291 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 SNHG28P0DPA3 235 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 CDK7P50613 346 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 NKX3-2P78367 333 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 SYDE2Q5VT97 1194 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 TAPT1Q6NXT6 567 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 FBXO16Q8IX29 292 aaPredicted RBP16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 CLEC4DQ8WXI8 215 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 STARD7Q9NQZ5 370 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 TBX21Q9UL17 535 aa16.33■□□□□ 0.2
GTF3C1-211ENST00000569653 MOXD2PA6NHM9 499 aa16.32■□□□□ 0.2
GTF3C1-211ENST00000569653 SMPD1P17405 629 aa16.32■□□□□ 0.2
GTF3C1-211ENST00000569653 ZNF543Q08ER8 600 aa16.32■□□□□ 0.2
GTF3C1-211ENST00000569653 NSMFQ6X4W1 530 aa16.32■□□□□ 0.2
GTF3C1-211ENST00000569653 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
GTF3C1-211ENST00000569653 GRIN2DO15399 1336 aa16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 GNASQ5JWF2 1037 aa16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 EEPD1Q7L9B9 569 aa16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 MORC4Q8TE76 937 aa16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 TOX2Q96NM4 488 aa16.31■□□□□ 0.2
GTF3C1-211ENST00000569653 CHD7Q9P2D1 2997 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 GOLGA8HP0CJ92 632 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 TNFAIP2Q03169 654 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 TMEM39AQ9NV64 488 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 STXBP5LQ9Y2K9 1186 aa16.3■□□□□ 0.2
GTF3C1-211ENST00000569653 GBF1Q92538 1859 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 ELP1O95163 1332 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 ASB14A6NK59 587 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 B4E1Z4 1266 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 ALDH5A1P51649 535 aaPredicted RBP16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 CXCL17Q6UXB2 119 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 C16orf59Q7L2K0 433 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 TLK2Q86UE8 772 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
GTF3C1-211ENST00000569653 SCN10AQ9Y5Y9 1956 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 ARVCFO00192 962 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 KDM4AO75164 1064 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 RAG1P15918 1043 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 SLC43A3Q8NBI5 491 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 PCSK9Q8NBP7 692 aaKnown RBP16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 TTC14Q96N46 770 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 UBA5Q9GZZ9 404 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 TTYH1Q9H313 450 aaPredicted RBP16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
GTF3C1-211ENST00000569653 KIAA1217Q5T5P2 1943 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 BAZ2BQ9UIF8 2168 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 UMODL1Q5DID0 1318 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 ZNF213O14771 459 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 DYNC1LI2O43237 492 aaPredicted RBP16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 CD4P01730 458 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 FSCN1Q16658 493 aaKnown RBP16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 ENAHQ8N8S7 591 aaPredicted RBP16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 ANKS1AQ92625 1134 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 ESR2Q92731 530 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 DSCC1Q9BVC3 393 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
GTF3C1-211ENST00000569653 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 WDR19Q8NEZ3 1342 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 DCDC2CA8MYV0 355 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 TIMP1P01033 207 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms