RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 HSP90AB4PQ58FF6 505 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 KRT40Q6A162 431 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 RPAP2Q8IXW5 612 aaPredicted RBP10.39□□□□□ -0.75
SMG1-216ENST00000569122 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMG1-216ENST00000569122 KIFC2Q96AC6 838 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 FBXL18Q96ME1 805 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 PRRX2Q99811 253 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMG1-216ENST00000569122 MKNK2Q9HBH9 465 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 RAVER2Q9HCJ3 691 aaKnown RBP10.39□□□□□ -0.75
SMG1-216ENST00000569122 VTA1Q9NP79 307 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 CD320Q9NPF0 282 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 TLR7Q9NYK1 1049 aaKnown RBP10.39□□□□□ -0.75
SMG1-216ENST00000569122 PRKAG3Q9UGI9 489 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 RAD50Q92878 1312 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.38□□□□□ -0.75
SMG1-216ENST00000569122 ST18O60284 1047 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 LPXNO60711 386 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 EFCAB14O75071 495 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 BCAR3O75815 825 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 NDUFB10O96000 172 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 SMPD1P17405 629 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
SMG1-216ENST00000569122 PTCRAQ6ISU1 281 aaPredicted RBP10.38□□□□□ -0.75
SMG1-216ENST00000569122 NFRKBQ6P4R8 1299 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 AACSQ86V21 672 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 FAM133AQ8N9E0 248 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 FGD4Q96M96 766 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 TGS1Q96RS0 853 aaKnown RBP10.38□□□□□ -0.75
SMG1-216ENST00000569122 CRBNQ96SW2 442 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 RAD9AQ99638 391 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 MTG1Q9BT17 334 aaPredicted RBP10.38□□□□□ -0.75
SMG1-216ENST00000569122 TRMT13Q9NUP7 481 aaKnown RBP10.38□□□□□ -0.75
SMG1-216ENST00000569122 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
SMG1-216ENST00000569122 TCF20Q9UGU0 1960 aaKnown RBP10.37□□□□□ -0.75
SMG1-216ENST00000569122 ASTN1O14525 1302 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 PRRC2BQ5JSZ5 2229 aaKnown RBP10.37□□□□□ -0.75
SMG1-216ENST00000569122 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 TCRBV5S4A2TA0A5A2 114 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 CYP2C9P11712 490 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 TRIM27P14373 513 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 KCNA5P22460 613 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 PSMC6P62333 389 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
SMG1-216ENST00000569122 PTPROQ16827 1216 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 DUSP28Q4G0W2 176 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 KIAA1211Q6ZU35 1233 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.37□□□□□ -0.75
SMG1-216ENST00000569122 CHURC1Q8WUH1 139 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 VWCEQ96DN2 955 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 NUP88Q99567 741 aaPredicted RBP10.37□□□□□ -0.75
SMG1-216ENST00000569122 ARMT1Q9H993 441 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 ARPP21Q9UBL0 812 aaPredicted RBP10.37□□□□□ -0.75
SMG1-216ENST00000569122 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
SMG1-216ENST00000569122 ZNF316A6NFI3 1004 aaPredicted RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 GOLIM4O00461 696 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 NKRFO15226 690 aaKnown RBP eCLIP10.36□□□□□ -0.751e-7■■□□□ 13.5
SMG1-216ENST00000569122 NCK2O43639 380 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 MBD4O95243 580 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 ERVK-21P61565 698 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 EVX2Q03828 476 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 ZSCAN25Q6NSZ9 544 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 FAM160B2Q86V87 743 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 ZNF444Q8N0Y2 327 aaPredicted RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 CLASRPQ8N2M8 674 aaKnown RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 MKL1Q969V6 931 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 MPHOSPH6Q99547 160 aaKnown RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 IRF2BPLQ9H1B7 796 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 HOMER2Q9NSB8 354 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 ADD3Q9UEY8 706 aaKnown RBP10.36□□□□□ -0.75
SMG1-216ENST00000569122 TRANK1O15050 2925 aa10.36□□□□□ -0.75
SMG1-216ENST00000569122 MYH1P12882 1939 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 ABHD14A-ACY1A0A1B0GW23 586 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 MYL3P08590 195 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 BMP3P12645 472 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 STAT2P52630 851 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 PTPN5P54829 565 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 PURAQ00577 322 aaKnown RBP10.35□□□□□ -0.75
SMG1-216ENST00000569122 TAPT1Q6NXT6 567 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 CTR9Q6PD62 1173 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 GMCL1P1Q8NEA9 526 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 AFAP1L1Q8TED9 768 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 GDPD5Q8WTR4 605 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 DNAJC2Q99543 621 aaKnown RBP10.35□□□□□ -0.75
SMG1-216ENST00000569122 SUGCTQ9HAC7 445 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms