RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 C6orf222P0C671 652 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-210ENST00000568416 SNHG28P0DPA3 235 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 Q7L0L9 218 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 ANKRD33Q7Z3H0 272 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 DEFB123Q8N688 67 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 PCSK9Q8NBP7 692 aaKnown RBP22.26■■□□□ 1.15
SPSB3-210ENST00000568416 ESR2Q92731 530 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 TOX2Q96NM4 488 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 SPC25Q9HBM1 224 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.25■■□□□ 1.15
SPSB3-210ENST00000568416 KIAA0355O15063 1070 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 CTAGE5O15320 804 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 PQBP1O60828 265 aaKnown RBP22.25■■□□□ 1.15
SPSB3-210ENST00000568416 ASGR1P07306 291 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 ITGB8P26012 769 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 NT5C2P49902 561 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 ZNF543Q08ER8 600 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
SPSB3-210ENST00000568416 ELP1O95163 1332 aa22.25■■□□□ 1.15
SPSB3-210ENST00000568416 TNFAIP2Q03169 654 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 FAAP100Q0VG06 881 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 SHHQ15465 462 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 C9orf50Q5SZB4 431 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 MORC4Q8TE76 937 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 GLT1D1Q96MS3 346 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 PURBQ96QR8 312 aaKnown RBP22.24■■□□□ 1.15
SPSB3-210ENST00000568416 DSCC1Q9BVC3 393 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 MTMR10Q9NXD2 777 aa22.24■■□□□ 1.15
SPSB3-210ENST00000568416 GNEQ9Y223 722 aaKnown RBP22.24■■□□□ 1.15
SPSB3-210ENST00000568416 DDX49Q9Y6V7 483 aaKnown RBP22.24■■□□□ 1.15
SPSB3-210ENST00000568416 BAATQ14032 418 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-210ENST00000568416 GNASQ5JWF2 1037 aa22.23■■□□□ 1.15
SPSB3-210ENST00000568416 DGKHQ86XP1 1220 aa22.23■■□□□ 1.15
SPSB3-210ENST00000568416 ZKSCAN3Q9BRR0 538 aa22.23■■□□□ 1.15
SPSB3-210ENST00000568416 NFIBO00712 420 aa22.22■■□□□ 1.15
SPSB3-210ENST00000568416 PDE4AP27815 886 aa22.22■■□□□ 1.15
SPSB3-210ENST00000568416 CDK7P50613 346 aa22.22■■□□□ 1.15
SPSB3-210ENST00000568416 TAPT1Q6NXT6 567 aa22.22■■□□□ 1.15
SPSB3-210ENST00000568416 TMEM39AQ9NV64 488 aa22.22■■□□□ 1.15
SPSB3-210ENST00000568416 LRRC37A2A6NM11 1700 aa22.22■■□□□ 1.15
SPSB3-210ENST00000568416 DCDC2CA8MYV0 355 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 KDM4AO75164 1064 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 RAG1P15918 1043 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 FAM109BQ6ICB4 259 aaPredicted RBP22.21■■□□□ 1.15
SPSB3-210ENST00000568416 FBXO16Q8IX29 292 aaPredicted RBP22.21■■□□□ 1.15
SPSB3-210ENST00000568416 CLEC4DQ8WXI8 215 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 PDGFCQ9NRA1 345 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 PNMA2Q9UL42 364 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 LAMA3Q16787 3333 aa22.21■■□□□ 1.15
SPSB3-210ENST00000568416 A0A0U1RQG5 324 aaPredicted RBP22.2■■□□□ 1.14
SPSB3-210ENST00000568416 SMPD1P17405 629 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 BEX3Q00994 111 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 CCDC178Q5BJE1 867 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 GPATCH4Q5T3I0 446 aaKnown RBP22.2■■□□□ 1.14
SPSB3-210ENST00000568416 IQSEC1Q6DN90 963 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 EEPD1Q7L9B9 569 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 TLK2Q86UE8 772 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 IQCA1Q86XH1 822 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 ANKS1AQ92625 1134 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 IL25Q9H293 177 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 VTA1Q9NP79 307 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 ADD3Q9UEY8 706 aaKnown RBP22.2■■□□□ 1.14
SPSB3-210ENST00000568416 TBX21Q9UL17 535 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 MROH7Q68CQ1 1323 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 WDR19Q8NEZ3 1342 aa22.2■■□□□ 1.14
SPSB3-210ENST00000568416 DNAH12Q6ZR08 3092 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 LOC102724159A0A0B4J2E5 919 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 B4E1Z4 1266 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 ARVCFO00192 962 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 GSPT1P15170 499 aaKnown RBP22.19■■□□□ 1.14
SPSB3-210ENST00000568416 ALDH5A1P51649 535 aaPredicted RBP22.19■■□□□ 1.14
SPSB3-210ENST00000568416 EPHB4P54760 987 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 PWP2Q15269 919 aaKnown RBP22.19■■□□□ 1.14
SPSB3-210ENST00000568416 IMMTQ16891 758 aaKnown RBP22.19■■□□□ 1.14
SPSB3-210ENST00000568416 SLC30A10Q6XR72 485 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 NOL8Q76FK4 1167 aaKnown RBP22.19■■□□□ 1.14
SPSB3-210ENST00000568416 PNMA1Q8ND90 353 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 CTNNA3Q9UI47 895 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 Q9Y3F1 56 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 LAMA4Q16363 1823 aa22.19■■□□□ 1.14
SPSB3-210ENST00000568416 MCM3APO60318 1980 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 GOLGA8HP0CJ92 632 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 PTGS1P23219 599 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 TMEM63BQ5T3F8 832 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 VTI1AQ96AJ9 217 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 ZSCAN10Q96SZ4 725 aaPredicted RBP22.18■■□□□ 1.14
SPSB3-210ENST00000568416 ZSWIM5Q9P217 1185 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 STXBP5LQ9Y2K9 1186 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 LCTP09848 1927 aa22.18■■□□□ 1.14
SPSB3-210ENST00000568416 PTPDC1A2A3K4 754 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 DYNC1LI2O43237 492 aaPredicted RBP22.17■■□□□ 1.14
SPSB3-210ENST00000568416 TIMP1P01033 207 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 FPGSQ05932 587 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 TTC22Q5TAA0 569 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 RNF207Q6ZRF8 634 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 FAM126BQ8IXS8 530 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 UBA5Q9GZZ9 404 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 AP5M1Q9H0R1 490 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 CPVLQ9H3G5 476 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms