RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 ADD1P35611 737 aaKnown RBP14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 BFSP1Q12934 665 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 ZNF827Q17R98 1081 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 JADE1Q6IE81 842 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 ZNF274Q96GC6 653 aaPredicted RBP14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 TRIM56Q9BRZ2 755 aaKnown RBP14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 KIAA1468Q9P260 1216 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 COL4A3BPQ9Y5P4 624 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 SCG2P13521 617 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 CYP4A11Q02928 519 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 NOP9Q86U38 636 aaKnown RBP14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 DISC1Q9NRI5 854 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 LARSQ9P2J5 1176 aaKnown RBP14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 MAD1L1Q9Y6D9 718 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 THAP12O43422 761 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 KRT3P12035 628 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 PDE6AP16499 860 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 PIK3CAP42336 1068 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 DCLK2Q8N568 766 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 MIS12Q9H081 205 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 KLHL14Q9P2G3 628 aa14.9□□□□□ -0.02
CX3CL1-204ENST00000565912 PTPRTO14522 1441 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 ERVV-2B6SEH9 535 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 PDE1CQ14123 709 aaPredicted RBP14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 NCAPGQ9BPX3 1015 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 TACO1Q9BSH4 297 aaKnown RBP14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 RNF8O76064 485 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 POLR2BP30876 1174 aaKnown RBP14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 RPS6KC1Q96S38 1066 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 VCX3AQ9NNX9 186 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 ARHGEF10O15013 1369 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 HDAC11Q96DB2 347 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 DDX27Q96GQ7 796 aaKnown RBP14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 PLEKHG3A1L390 1219 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 RPGRIP1Q96KN7 1286 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 HOMER3Q9NSC5 361 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 CPSF2Q9P2I0 782 aaKnown RBP14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 ZNF148Q9UQR1 794 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 NUB1Q9Y5A7 615 aa14.89□□□□□ -0.03
CX3CL1-204ENST00000565912 A0A0D9SFI3 127 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 H7C0C1 242 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 TLR3O15455 904 aaKnown RBP14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ATP5OP48047 213 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ARHGAP4P98171 946 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 CHMP6Q96FZ7 201 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ABCA8O94911 1581 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 A6NJR5 290 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 WHAMMP3Q1A5X7 153 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 GJA10Q969M2 543 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 DACT3Q96B18 629 aaPredicted RBP14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 BAG5Q9UL15 447 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 NSFP46459 744 aaKnown RBP14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 MAP3K21Q5TCX8 1036 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 KRT26Q7Z3Y9 468 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 TM6SF1Q9BZW5 370 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 BAG2O95816 211 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ATF2P15336 505 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ABCB5Q2M3G0 1257 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 USP28Q96RU2 1077 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 RTEL1Q9NZ71 1219 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 ZNF445P59923 1031 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 PTH1RQ03431 593 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 RINT1Q6NUQ1 792 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 DPP9Q86TI2 863 aa14.88□□□□□ -0.03
CX3CL1-204ENST00000565912 RPN1P04843 607 aaKnown RBP14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 CHRNDQ07001 517 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 TTLL7Q6ZT98 887 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 PCDHA1Q9Y5I3 950 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 ECE1P42892 770 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 GNGT1P63211 74 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 CCDC93Q567U6 631 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 TMTC4Q5T4D3 741 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 CLIC6Q96NY7 704 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 METTL14Q9HCE5 456 aaKnown RBP14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 H2AFZP0C0S5 128 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 FAM26FQ5R3K3 315 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 H2AFVQ71UI9 128 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 ABI1Q8IZP0 508 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 HVCN1Q96D96 273 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 SMYD2Q9NRG4 433 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 SEPT9Q9UHD8 586 aaPredicted RBP14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 MGEA5O60502 916 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 HSPD1P10809 573 aaKnown RBP14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 XPAP23025 273 aaPredicted RBP14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 UBXN2AP68543 259 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 KCTD2Q14681 263 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 DBN1Q16643 649 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 ANAPC5Q9UJX4 755 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 BTBD18B2RXH4 712 aa14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 GTPBP6O43824 516 aaPredicted RBP14.87□□□□□ -0.03
CX3CL1-204ENST00000565912 YWHAGP61981 247 aaKnown RBP eCLIP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms