RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 F13A1P00488 732 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 GJB1P08034 283 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 KIF22Q14807 665 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 SH3D19Q5HYK7 790 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 KRT40Q6A162 431 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 HEATR3Q7Z4Q2 680 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 GPKOWQ92917 476 aaPredicted RBP eCLIP12.77□□□□□ -0.37
SF3B3-205ENST00000564899 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 RNF208Q9H0X6 261 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-205ENST00000564899 PRR12Q9ULL5 1215 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 MYPNQ86TC9 1320 aa12.77□□□□□ -0.37
SF3B3-205ENST00000564899 MGAMO43451 1857 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 PNMA6FA0A0J9YX94 578 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 CXCL11O14625 94 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 ZBTB5O15062 677 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-205ENST00000564899 CYP2C8P10632 490 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-205ENST00000564899 MCTP1Q6DN14 999 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 RAET1EQ8TD07 263 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
SF3B3-205ENST00000564899 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 MTMR8Q96EF0 704 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 KCNJ14Q9UNX9 436 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 KCNH4Q9UQ05 1017 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 DNAH12Q6ZR08 3092 aa12.76□□□□□ -0.37
SF3B3-205ENST00000564899 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 STXBP3O00186 592 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 MMP1P03956 469 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 ELNP15502 786 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 SNAP25P60880 206 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 Q7L0L9 218 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 DIS3LQ8TF46 1054 aaKnown RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 SLF1Q9BQI6 1058 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 ZCCHC17Q9NP64 241 aaKnown RBP12.75□□□□□ -0.37
SF3B3-205ENST00000564899 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 FBXO28Q9NVF7 368 aa12.75□□□□□ -0.37
SF3B3-205ENST00000564899 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 CDH23Q9H251 3354 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 PPP1R11O60927 126 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 FLOT1O75955 427 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 GNRH1P01148 92 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 BCRP11274 1271 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 NAPAP54920 295 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 PRMT2P55345 433 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 NLRP5P59047 1200 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 RESTQ13127 1097 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 DIS3L2Q8IYB7 885 aaKnown RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 CCDC12Q8WUD4 166 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 PHF20Q9BVI0 1012 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 BRMS1Q9HCU9 246 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 BIN2Q9UBW5 565 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-205ENST00000564899 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 ATP6V1DQ9Y5K8 247 aa12.74□□□□□ -0.37
SF3B3-205ENST00000564899 DOCK3Q8IZD9 2030 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 CALML3P27482 149 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 KRT2P35908 639 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-205ENST00000564899 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-205ENST00000564899 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 PRPF38AQ8NAV1 312 aaKnown RBP12.73□□□□□ -0.37
SF3B3-205ENST00000564899 PROCA1Q8NCQ7 364 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-205ENST00000564899 COA7Q96BR5 231 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 HTATIP2Q9BUP3 242 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 AMNQ9BXJ7 453 aa12.73□□□□□ -0.37
SF3B3-205ENST00000564899 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-205ENST00000564899 BAZ2BQ9UIF8 2168 aaKnown RBP12.72□□□□□ -0.37
SF3B3-205ENST00000564899 KIF28PB7ZC32 967 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms