RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C1QTNF9P0C862 333 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 HLA-DQA1Q5Y7H0 255 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 CYP2R1Q6VVX0 501 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 JAMLQ86YT9 394 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 FAM178BQ8IXR5 827 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 BHLHE22Q8NFJ8 381 aaPredicted RBP7.8□□□□□ -1.16
UBR1-205ENST00000564540 PPP1R14AQ96A00 147 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 GMLQ99445 158 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 APBA2Q99767 749 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 ACSL6Q9UKU0 697 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 AKT3Q9Y243 479 aa7.8□□□□□ -1.16
UBR1-205ENST00000564540 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
UBR1-205ENST00000564540 DDAH1O94760 285 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 KCNH1O95259 989 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 TSPAN15O95858 294 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 RAP1GAPP47736 663 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 CYP4F8P98187 520 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 AMPD2Q01433 879 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 MVKQ03426 396 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 MRM1Q6IN84 353 aaKnown RBP7.79□□□□□ -1.16
UBR1-205ENST00000564540 RCSD1Q6JBY9 416 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 CILP2Q8IUL8 1156 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 HNRNPLLQ8WVV9 542 aaKnown RBP7.79□□□□□ -1.16
UBR1-205ENST00000564540 SLC26A8Q96RN1 970 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 PPP1R16BQ96T49 567 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 EMC9Q9Y3B6 208 aa7.79□□□□□ -1.16
UBR1-205ENST00000564540 C2orf71A6NGG8 1288 aa7.78□□□□□ -1.16
UBR1-205ENST00000564540 GRB10Q13322 594 aa7.78□□□□□ -1.16
UBR1-205ENST00000564540 EEF1DP3Q658K8 133 aa7.78□□□□□ -1.16
UBR1-205ENST00000564540 BVESQ8NE79 360 aa7.78□□□□□ -1.16
UBR1-205ENST00000564540 KCNN1Q92952 543 aa7.78□□□□□ -1.16
UBR1-205ENST00000564540 BACE2Q9Y5Z0 518 aa7.78□□□□□ -1.16
UBR1-205ENST00000564540 NFIBO00712 420 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 TBC1D8O95759 1140 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 TMEM253P0C7T8 217 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 SEPHS1P49903 392 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 ZNF143P52747 638 aaPredicted RBP7.77□□□□□ -1.17
UBR1-205ENST00000564540 ERVFRD-1P60508 538 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 FXNQ16595 210 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 ATG14Q6ZNE5 492 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 CELF2-AS1Q8N7Q2 184 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 SGPP1Q9BX95 441 aa7.77□□□□□ -1.17
UBR1-205ENST00000564540 A0A1W2PQ27 194 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 A0A1W2PQ64 194 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 A0A1W2PQC6 194 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 A0A1W2PQD8 194 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 TBX1O43435 398 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 PEX10O60683 326 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 GJB6O95452 261 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 NAT2P11245 290 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 ARL4AP40617 200 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 ZC3H6P61129 1189 aaKnown RBP7.76□□□□□ -1.17
UBR1-205ENST00000564540 LAPTM5Q13571 262 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 NAALADL2Q58DX5 795 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 TMEM132EQ6IEE7 984 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 ANKS3Q6ZW76 656 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 TNFRSF12AQ9NP84 129 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 ST7Q9NRC1 585 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 NCANO14594 1321 aa7.76□□□□□ -1.17
UBR1-205ENST00000564540 NUDT19A8MXV4 375 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 NOP56O00567 594 aaKnown RBP7.75□□□□□ -1.17
UBR1-205ENST00000564540 SUSD5O60279 629 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 MPOP05164 745 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 MED14OSP0DP75 135 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 TACR1P25103 407 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 L1CAMP32004 1257 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 VIPR1P32241 457 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 SRSF3P84103 164 aaKnown RBP7.75□□□□□ -1.17
UBR1-205ENST00000564540 SV2CQ496J9 727 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 GTF2IRD2BQ6EKJ0 949 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 GTF2IRD2Q86UP8 949 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 CPNE8Q86YQ8 564 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 TRIM59Q8IWR1 403 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 MRGPRX3Q96LB0 322 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
UBR1-205ENST00000564540 TEX51A0A1B0GUA7 166 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 PRRG2O14669 202 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 ITGAVP06756 1048 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 GLDCP23378 1020 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 YBX1P67809 324 aaKnown RBP7.74□□□□□ -1.17
UBR1-205ENST00000564540 DLG4P78352 724 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 SCRN1Q12765 414 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 RAB3GAP1Q15042 981 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 POMZP3Q6PJE2 187 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 GCM1Q9NP62 436 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 CD320Q9NPF0 282 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 KLHL14Q9P2G3 628 aa7.74□□□□□ -1.17
UBR1-205ENST00000564540 R3HCC1Q9Y3T6 440 aaKnown RBP7.74□□□□□ -1.17
UBR1-205ENST00000564540 NPHP3-ACAD11A0A0J9YXS1 232 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 NPIPB6E9PJ23 425 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 KLF4O43474 513 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 SEMA7AO75326 666 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 CYP4F3Q08477 520 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 RPTNQ6XPR3 784 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 ANKLE2Q86XL3 938 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 CRACR2BQ8N4Y2 399 aaPredicted RBP7.73□□□□□ -1.17
UBR1-205ENST00000564540 BTN2A2Q8WVV5 523 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 COPS5Q92905 334 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 PDLIM7Q9NR12 457 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms