RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 HOOK2Q96ED9 719 aa13.7□□□□□ -0.22
SCAMP2-204ENST00000563829 hCG_1642624A0A1W2PR95 340 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 ANP32DO95626 131 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 MYZAPP0CAP1 466 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 PMS1P54277 932 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 EARS2Q5JPH6 523 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 CAPRIN2Q6IMN6 1127 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 BZW1Q7L1Q6 419 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 CCDC170Q8IYT3 715 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 MAB21L3Q8N8X9 362 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 ALS2CR12Q96Q35 445 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 NUP58Q9BVL2 599 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 EIF4E1BA6NMX2 242 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 WNT7AO00755 349 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 TRAPPC3O43617 180 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 BUB1O43683 1085 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 IFNAR1P17181 557 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 ADCY2Q08462 1091 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 GKAP1Q5VSY0 366 aaPredicted RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 TRIM47Q96LD4 638 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 KRT12Q99456 494 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 SNX1Q13596 522 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 EMC10Q5UCC4 262 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 YIPF3Q9GZM5 350 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 CPSF2Q9P2I0 782 aaKnown RBP13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 PCDHA13Q9Y5I0 950 aa13.69□□□□□ -0.22
SCAMP2-204ENST00000563829 H7C1D1 291 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 RTN1Q16799 776 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 ZNF507Q8TCN5 953 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 ETAA1Q9NY74 926 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 ZSWIM5Q9P217 1185 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 TRPC6Q9Y210 931 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 EID1Q9Y6B2 187 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 MYO5AQ9Y4I1 1855 aaKnown RBP13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 CFAP221Q4G0U5 840 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 THEMIS2Q5TEJ8 643 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 ZNF658Q5TYW1 1059 aaPredicted RBP13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 ZNF572Q7Z3I7 529 aaPredicted RBP13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 TBC1D1Q86TI0 1168 aaPredicted RBP13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 RAPGEF5Q92565 580 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 TATDN2Q93075 761 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 MTRQ99707 1265 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 TMBIM4Q9HC24 238 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 GDF3Q9NR23 364 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 HEG1Q9ULI3 1381 aa13.68□□□□□ -0.22
SCAMP2-204ENST00000563829 RPN1P04843 607 aaKnown RBP13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 TNFRSF8P28908 595 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CD302Q8IX05 232 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CCDC85AQ96PX6 553 aaPredicted RBP13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CEP126Q9P2H0 1117 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 EYA2O00167 538 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 AKR1B10O60218 316 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 DNM2P50570 870 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 ZBED6P86452 979 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 FOXO4P98177 505 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CDC37Q16543 378 aaPredicted RBP13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CCDC26Q8TAB7 109 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 CCT6BQ92526 530 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 EXOC1Q9NV70 894 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 C15orf41Q9Y2V0 281 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 PRLRP16471 622 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 SALL4Q9UJQ4 1053 aa13.67□□□□□ -0.22
SCAMP2-204ENST00000563829 RASSF10A6NK89 507 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 PRDM1O75626 825 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 UPP2O95045 317 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 DEXIO95424 95 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 CTNNA1P35221 906 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 CDCA2Q69YH5 1023 aaPredicted RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 SGMS1Q86VZ5 419 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 CCDC63Q8NA47 563 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 IP6K1Q92551 441 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms