RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.06■■□□□ 1.6
LINC01960-201ENST00000563759 CTDP1Q9Y5B0 961 aaPredicted RBP25.06■■□□□ 1.6
LINC01960-201ENST00000563759 IRF6O14896 467 aa25.05■■□□□ 1.6
LINC01960-201ENST00000563759 BMP15O95972 392 aa25.05■■□□□ 1.6
LINC01960-201ENST00000563759 WNT7AO00755 349 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 ZNF174Q15697 407 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 SYAP1Q96A49 352 aaPredicted RBP25.04■■□□□ 1.6
LINC01960-201ENST00000563759 OPTNQ96CV9 577 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 ICAM1P05362 532 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 CLK2P49760 499 aaKnown RBP25.04■■□□□ 1.6
LINC01960-201ENST00000563759 PPIL2Q13356 520 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 LDLRAD1Q5T700 205 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 ADALQ6DHV7 355 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 SLC38A10Q9HBR0 1119 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 CCPG1Q9ULG6 757 aa25.04■■□□□ 1.6
LINC01960-201ENST00000563759 MCM7P33993 719 aa25.03■■□□□ 1.6
LINC01960-201ENST00000563759 TBCKQ8TEA7 893 aa25.03■■□□□ 1.6
LINC01960-201ENST00000563759 ABCB11O95342 1321 aa25.03■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L15C9J2P7 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L13C9JLJ4 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L11C9JVI0 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L18D6R9N7 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L22D6RA61 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L17D6RBQ6 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L19D6RCP7 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L20D6RJB6 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 FKBP1BP68106 108 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L24Q0WX57 530 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 USP17L6PQ6QN14 398 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 GADL1Q6ZQY3 521 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 NEK8Q86SG6 692 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 MRPL11Q9Y3B7 192 aaKnown RBP25.02■■□□□ 1.6
LINC01960-201ENST00000563759 ZBED4O75132 1171 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 CELF2O95319 508 aaKnown RBP25.02■■□□□ 1.6
LINC01960-201ENST00000563759 FDX1P10109 184 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 CCAR1Q8IX12 1150 aaKnown RBP25.02■■□□□ 1.6
LINC01960-201ENST00000563759 CPXCR1Q8N123 301 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 KRI1Q8N9T8 703 aaKnown RBP25.02■■□□□ 1.6
LINC01960-201ENST00000563759 ATG4CQ96DT6 458 aa25.02■■□□□ 1.6
LINC01960-201ENST00000563759 GBA2Q9HCG7 927 aaPredicted RBP25.02■■□□□ 1.6
LINC01960-201ENST00000563759 A0A0G2JLL6 359 aaPredicted RBP25.01■■□□□ 1.59
LINC01960-201ENST00000563759 UNCXA6NJT0 531 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 CXCL11O14625 94 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 COG2Q14746 738 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 LETM2Q2VYF4 491 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 CATSPERGQ6ZRH7 1159 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 CCDC73Q6ZRK6 1079 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 PRRT2Q7Z6L0 340 aaPredicted RBP25.01■■□□□ 1.59
LINC01960-201ENST00000563759 PROCA1Q8NCQ7 364 aaPredicted RBP25.01■■□□□ 1.59
LINC01960-201ENST00000563759 AGBL1Q96MI9 1066 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 TMEM63CQ9P1W3 806 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 ZNF536O15090 1300 aa25.01■■□□□ 1.59
LINC01960-201ENST00000563759 A0A1W2PQ27 194 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 A0A1W2PQ64 194 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 A0A1W2PQD8 194 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 VWA5AO00534 786 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 MEIS2O14770 477 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 OPLAHO14841 1288 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 LIG1P18858 919 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 AP3B2Q13367 1082 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 MRPS27Q92552 414 aaKnown RBP25■■□□□ 1.59
LINC01960-201ENST00000563759 SLC10A4Q96EP9 437 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 KCNH4Q9UQ05 1017 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 CUTAO60888 179 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 DSG3P32926 999 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 PTGDRQ13258 359 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 AXDND1Q5T1B0 1012 aaPredicted RBP25■■□□□ 1.59
LINC01960-201ENST00000563759 TREML2Q5T2D2 321 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 MCTP2Q6DN12 878 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 CHADLQ6NUI6 762 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 C2orf69Q8N8R5 385 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 FSIP1Q8NA03 581 aa25■■□□□ 1.59
LINC01960-201ENST00000563759 RAVER2Q9HCJ3 691 aaKnown RBP25■■□□□ 1.59
LINC01960-201ENST00000563759 A0A0G2JMZ2 1700 aa24.99■■□□□ 1.59
LINC01960-201ENST00000563759 CCNT1O60563 726 aaKnown RBP24.99■■□□□ 1.59
LINC01960-201ENST00000563759 ATP2C1P98194 919 aaPredicted RBP24.99■■□□□ 1.59
LINC01960-201ENST00000563759 PNMA2Q9UL42 364 aa24.99■■□□□ 1.59
LINC01960-201ENST00000563759 MRVI1Q9Y6F6 885 aa24.99■■□□□ 1.59
LINC01960-201ENST00000563759 MORC2Q9Y6X9 1032 aaPredicted RBP24.99■■□□□ 1.59
LINC01960-201ENST00000563759 SPDYE3A6NKU9 549 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 CFBP00751 764 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 TEX2Q8IWB9 1127 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 WNK4Q96J92 1243 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 CLIC6Q96NY7 704 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 ANO3Q9BYT9 981 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 FBXO2Q9UK22 296 aaPredicted RBP24.98■■□□□ 1.59
LINC01960-201ENST00000563759 MYPNQ86TC9 1320 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 ALAS1P13196 640 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 HOXA13P31271 388 aaPredicted RBP24.98■■□□□ 1.59
LINC01960-201ENST00000563759 GOLPH3LQ9H4A5 285 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 HOXC10Q9NYD6 342 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 DACT1Q9NYF0 836 aa24.98■■□□□ 1.59
LINC01960-201ENST00000563759 PIK3CDO00329 1044 aa24.97■■□□□ 1.59
LINC01960-201ENST00000563759 PTPREP23469 700 aa24.97■■□□□ 1.59
LINC01960-201ENST00000563759 CCDC183Q5T5S1 534 aa24.97■■□□□ 1.59
LINC01960-201ENST00000563759 HOMER2Q9NSB8 354 aa24.97■■□□□ 1.59
LINC01960-201ENST00000563759 SRPRBQ9Y5M8 271 aaKnown RBP24.97■■□□□ 1.59
LINC01960-201ENST00000563759 NR1I2O75469 434 aa24.96■■□□□ 1.59
LINC01960-201ENST00000563759 FOSP01100 380 aaPredicted RBP24.96■■□□□ 1.59
LINC01960-201ENST00000563759 FERMT2Q96AC1 680 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms