RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 SDHBP21912 280 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 CYP4F8P98187 520 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 AMPD2Q01433 879 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 EEF1DP3Q658K8 133 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 OLFML2BQ68BL8 750 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 ATG14Q6ZNE5 492 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 ANKLE2Q86XL3 938 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 MCF2L2Q86YR7 1114 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 KCNN1Q92952 543 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 TOX2Q96NM4 488 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 BACE2Q9Y5Z0 518 aa6.03□□□□□ -1.44
GDE1-202ENST00000563645 A0A1W2PQ27 194 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 A0A1W2PQ64 194 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 A0A1W2PQC6 194 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 A0A1W2PQD8 194 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 ABLIM1O14639 778 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 VAMP4O75379 141 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 TBC1D8O95759 1140 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 MPOP05164 745 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 ETFBP38117 255 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 CORO7P57737 925 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 YBX1P67809 324 aaKnown RBP6.02□□□□□ -1.45
GDE1-202ENST00000563645 DLG4P78352 724 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 MVKQ03426 396 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 DPY19L1Q2PZI1 675 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 LARP1BQ659C4 914 aaKnown RBP6.02□□□□□ -1.45
GDE1-202ENST00000563645 C6orf15Q6UXA7 325 aaPredicted RBP6.02□□□□□ -1.45
GDE1-202ENST00000563645 CRACR2BQ8N4Y2 399 aaPredicted RBP6.02□□□□□ -1.45
GDE1-202ENST00000563645 SLC43A3Q8NBI5 491 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 APBA2Q99767 749 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 EMC9Q9Y3B6 208 aa6.02□□□□□ -1.45
GDE1-202ENST00000563645 B2RBV5 119 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 NPIPB6E9PJ23 425 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 MSL3P1P0C860 447 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 DNAJA1P31689 397 aaKnown RBP6.01□□□□□ -1.45
GDE1-202ENST00000563645 VIPR1P32241 457 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 SEPHS1P49903 392 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 SRSF3P84103 164 aaKnown RBP6.01□□□□□ -1.45
GDE1-202ENST00000563645 TMEM62Q0P6H9 643 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 KCNA10Q16322 511 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 TMEM132EQ6IEE7 984 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 POMZP3Q6PJE2 187 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 FAM178BQ8IXR5 827 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 LRRC56Q8IYG6 542 aaPredicted RBP6.01□□□□□ -1.45
GDE1-202ENST00000563645 BVESQ8NE79 360 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 ZNF408Q9H9D4 720 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 GCM1Q9NP62 436 aa6.01□□□□□ -1.45
GDE1-202ENST00000563645 C2orf71A6NGG8 1288 aa6□□□□□ -1.45
GDE1-202ENST00000563645 CFPP27918 469 aa6□□□□□ -1.45
GDE1-202ENST00000563645 L1CAMP32004 1257 aa6□□□□□ -1.45
GDE1-202ENST00000563645 RAB3GAP1Q15042 981 aa6□□□□□ -1.45
GDE1-202ENST00000563645 C1QL4Q86Z23 238 aa6□□□□□ -1.45
GDE1-202ENST00000563645 ZSCAN18Q8TBC5 510 aaPredicted RBP6□□□□□ -1.45
GDE1-202ENST00000563645 KRTAP9-9Q9BYP9 154 aa6□□□□□ -1.45
GDE1-202ENST00000563645 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
GDE1-202ENST00000563645 PDLIM7Q9NR12 457 aa6□□□□□ -1.45
GDE1-202ENST00000563645 KLHL14Q9P2G3 628 aa6□□□□□ -1.45
GDE1-202ENST00000563645 MBD1Q9UIS9 605 aaPredicted RBP6□□□□□ -1.45
GDE1-202ENST00000563645 SMG5Q9UPR3 1016 aaKnown RBP6□□□□□ -1.45
GDE1-202ENST00000563645 NUDT19A8MXV4 375 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 NOP56O00567 594 aaKnown RBP5.99□□□□□ -1.45
GDE1-202ENST00000563645 KCNH1O95259 989 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 LINC00310P59036 64 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 FXNQ16595 210 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 TRIM59Q8IWR1 403 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 PPP1R14AQ96A00 147 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 GMLQ99445 158 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 SGPP1Q9BX95 441 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 SIRT5Q9NXA8 310 aa5.99□□□□□ -1.45
GDE1-202ENST00000563645 ARID1BQ8NFD5 2236 aaPredicted RBP5.98□□□□□ -1.45
GDE1-202ENST00000563645 TRBV23OR9-2A0A075B6M9 112 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 A0A1W2PQJ5 194 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 SRGAP3O43295 1099 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 SUSD5O60279 629 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 DDAH1O94760 285 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 CBX2Q14781 532 aaPredicted RBP5.98□□□□□ -1.45
GDE1-202ENST00000563645 NR1I3Q14994 352 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 PLEKHN1Q494U1 663 aaPredicted RBP5.98□□□□□ -1.45
GDE1-202ENST00000563645 BICRALQ6AI39 1079 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 GTF2IRD2BQ6EKJ0 949 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 MRM1Q6IN84 353 aaKnown RBP5.98□□□□□ -1.45
GDE1-202ENST00000563645 RPTNQ6XPR3 784 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 TMC6Q7Z403 805 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 GTF2IRD2Q86UP8 949 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 NLGN2Q8NFZ4 835 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 MRGPRX3Q96LB0 322 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 CNTD2Q9H8S5 307 aa5.98□□□□□ -1.45
GDE1-202ENST00000563645 NPHP3-ACAD11A0A0J9YXS1 232 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 CYBBP04839 570 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 DBHP09172 617 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 PAMP19021 973 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 TACR1P25103 407 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 MAPKAPK2P49137 400 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 EPHB3P54753 998 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 RBM10P98175 930 aaKnown RBP5.97□□□□□ -1.45
GDE1-202ENST00000563645 SCRN1Q12765 414 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 CIAPIN1Q6FI81 312 aa5.97□□□□□ -1.45
GDE1-202ENST00000563645 PAQR3Q6TCH7 311 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms