RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TMEM63BQ5T3F8 832 aa19.9■□□□□ 0.78
HDGFL3-203ENST00000563404 PURBQ96QR8 312 aaKnown RBP19.9■□□□□ 0.78
HDGFL3-203ENST00000563404 PDGFCQ9NRA1 345 aa19.9■□□□□ 0.78
HDGFL3-203ENST00000563404 CYP39A1Q9NYL5 469 aa19.9■□□□□ 0.78
HDGFL3-203ENST00000563404 MTMR7Q9Y216 660 aa19.9■□□□□ 0.78
HDGFL3-203ENST00000563404 TMEM265A0A087WTH1 108 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 RANBP6O60518 1105 aaKnown RBP19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 CD4P01730 458 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 FGRP09769 529 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 LCTP09848 1927 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 CSF2RAP15509 400 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 SMPD1P17405 629 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 GRIN2CQ14957 1233 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 PPP4R3BQ5MIZ7 849 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 TMEM240Q5SV17 173 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 ANKRD45Q5TZF3 282 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 TTBK2Q6IQ55 1244 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 TAPT1Q6NXT6 567 aa19.89■□□□□ 0.77
HDGFL3-203ENST00000563404 GRIN2DO15399 1336 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 ASB14A6NK59 587 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 ORC4O43929 436 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 FOSL2P15408 326 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 DNAJB2P25686 324 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 RRP1P56182 461 aaKnown RBP19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 ALX1Q15699 326 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 RASIP1Q5U651 963 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 CXCL17Q6UXB2 119 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 EEPD1Q7L9B9 569 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 TLK2Q86UE8 772 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 FBXO16Q8IX29 292 aaPredicted RBP19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 SLC43A3Q8NBI5 491 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 EVI5LQ96CN4 794 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 FAM227BQ96M60 508 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 PPP1R12CQ9BZL4 782 aa19.88■□□□□ 0.77
HDGFL3-203ENST00000563404 ACRP10323 421 aa19.87■□□□□ 0.77
HDGFL3-203ENST00000563404 PPIGQ13427 754 aaKnown RBP eCLIP19.87■□□□□ 0.77
HDGFL3-203ENST00000563404 NOL8Q76FK4 1167 aaKnown RBP19.87■□□□□ 0.77
HDGFL3-203ENST00000563404 CRBNQ96SW2 442 aa19.87■□□□□ 0.77
HDGFL3-203ENST00000563404 RANBP17Q9H2T7 1088 aaKnown RBP19.87■□□□□ 0.77
HDGFL3-203ENST00000563404 CCPG1Q9ULG6 757 aa19.87■□□□□ 0.77
HDGFL3-203ENST00000563404 A0A0D9SFI3 127 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 GRXCR1A8MXD5 290 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 DYNC1LI2O43237 492 aaPredicted RBP19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 FGAP02671 866 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 ICAM1P05362 532 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 CYP2C18P33260 490 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 SLC16A2P36021 539 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 PDE1AP54750 535 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 FSCN1Q16658 493 aaKnown RBP19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 CCDC96Q2M329 555 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 NSMFQ6X4W1 530 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 MORC4Q8TE76 937 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 DCAF4Q8WV16 495 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 HELLSQ9NRZ9 838 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 CHD9Q3L8U1 2897 aa19.86■□□□□ 0.77
HDGFL3-203ENST00000563404 UMODL1Q5DID0 1318 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 TLR3O15455 904 aaKnown RBP19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 PBX2P40425 430 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 BTNL9Q6UXG8 535 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 ZNF365Q70YC5 407 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 TMEM199Q8N511 208 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 TIFAQ96CG3 184 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 TMEM47Q9BQJ4 181 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 ZNF576Q9H609 170 aa19.85■□□□□ 0.77
HDGFL3-203ENST00000563404 FRMPD2Q68DX3 1309 aaPredicted RBP19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 ITGA7Q13683 1181 aa19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 BAATQ14032 418 aaPredicted RBP19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 IQSEC1Q6DN90 963 aa19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 ZNF589Q86UQ0 364 aaPredicted RBP19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 USP38Q8NB14 1042 aa19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 PBX4Q9BYU1 374 aa19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 AP5M1Q9H0R1 490 aa19.84■□□□□ 0.77
HDGFL3-203ENST00000563404 NFIBO00712 420 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 HSPD1P10809 573 aaKnown RBP19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 PSMC6P62333 389 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 MCMDC2Q4G0Z9 681 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 RRP12Q5JTH9 1297 aaKnown RBP19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 SYDE2Q5VT97 1194 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 TRPV6Q9H1D0 765 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 VTA1Q9NP79 307 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 GPCPD1Q9NPB8 672 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 TOMM22Q9NS69 142 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 TCP11L1Q9NUJ3 509 aa19.83■□□□□ 0.77
HDGFL3-203ENST00000563404 B4GALT4O60513 344 aa19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 CABYRO75952 493 aa19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 TOP1P11387 765 aaKnown RBP19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 NMIQ13287 307 aaPredicted RBP19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 PSRC1Q6PGN9 363 aaPredicted RBP19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 KIAA1211Q6ZU35 1233 aa19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 HIPK3Q9H422 1215 aa19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 IL23AQ9NPF7 189 aa19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 CXXC1Q9P0U4 656 aaPredicted RBP19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 Q9Y3F1 56 aa19.82■□□□□ 0.76
HDGFL3-203ENST00000563404 ALDH5A1P51649 535 aaPredicted RBP19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 HAND2P61296 217 aa19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 SLC30A10Q6XR72 485 aa19.81■□□□□ 0.76
HDGFL3-203ENST00000563404 CLEC4DQ8WXI8 215 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms