RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
CNN2-205ENST00000562958 COG1Q8WTW3 980 aa16.27■□□□□ 0.2
CNN2-205ENST00000562958 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
CNN2-205ENST00000562958 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
CNN2-205ENST00000562958 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
CNN2-205ENST00000562958 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
CNN2-205ENST00000562958 NUTM2BA6NNL0 878 aaPredicted RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 NUTM2EB1AL46 878 aaPredicted RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 USO1O60763 962 aaKnown RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 HNRNPH3P31942 346 aaKnown RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.19
CNN2-205ENST00000562958 CNNM4Q6P4Q7 775 aa16.27■□□□□ 0.19
CNN2-205ENST00000562958 AFAP1L1Q8TED9 768 aa16.27■□□□□ 0.19
CNN2-205ENST00000562958 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 MMS19Q96T76 1030 aa16.27■□□□□ 0.19
CNN2-205ENST00000562958 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 SUGCTQ9HAC7 445 aa16.27■□□□□ 0.19
CNN2-205ENST00000562958 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.19
CNN2-205ENST00000562958 MYO1CO00159 1063 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 N4BP1O75113 896 aaKnown RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 FGFR1OPO95684 399 aaKnown RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 HIBADHP31937 336 aaKnown RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 SPA17Q15506 151 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 CABP7Q86V35 215 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 SECISBP2LQ93073 1101 aaKnown RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 TRIM10Q9UDY6 481 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 HPCAL4Q9UM19 191 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 B4DLN1 442 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 RNF40O75150 1001 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 OR52Z1P0C646 297 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 FAM204AQ9H8W3 233 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 RRP15Q9Y3B9 282 aaKnown RBP16.26■□□□□ 0.19
CNN2-205ENST00000562958 JRKLQ9Y4A0 524 aa16.26■□□□□ 0.19
CNN2-205ENST00000562958 FLT1P17948 1338 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 STXBP3O00186 592 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 TACC1O75410 805 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 TNNT3P45378 269 aaPredicted RBP16.25■□□□□ 0.19
CNN2-205ENST00000562958 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
CNN2-205ENST00000562958 TFAP4Q01664 338 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 FOXR2Q6PJQ5 311 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 CERS3Q8IU89 383 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 MMGT1Q8N4V1 131 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 CRACR2AQ9BSW2 395 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 TRIM9Q9C026 710 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 BAZ2BQ9UIF8 2168 aaKnown RBP16.25■□□□□ 0.19
CNN2-205ENST00000562958 STRCQ7RTU9 1775 aa16.25■□□□□ 0.19
CNN2-205ENST00000562958 ENC1O14682 589 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
CNN2-205ENST00000562958 TFRCP02786 760 aaKnown RBP16.24■□□□□ 0.19
CNN2-205ENST00000562958 PDE4DQ08499 809 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 ITPK1Q13572 414 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 GPKOWQ92917 476 aaPredicted RBP eCLIP16.24■□□□□ 0.199e-6■■□□□ 14.5
CNN2-205ENST00000562958 NOC4LQ9BVI4 516 aaKnown RBP16.24■□□□□ 0.19
CNN2-205ENST00000562958 TMEM60Q9H2L4 133 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 NAV1Q8NEY1 1877 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 SYF2O95926 243 aaKnown RBP16.24■□□□□ 0.19
CNN2-205ENST00000562958 IDEP14735 1019 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 INF2Q27J81 1249 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 CCNI2Q6ZMN8 369 aaPredicted RBP16.24■□□□□ 0.19
CNN2-205ENST00000562958 CCDC42Q96M95 316 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 SPZ1Q9BXG8 430 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 ZMYND12Q9H0C1 365 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 HDAC6Q9UBN7 1215 aa16.24■□□□□ 0.19
CNN2-205ENST00000562958 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 LCA5LO95447 670 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 VEGFAP15692 232 aaPredicted RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 GNA11P29992 359 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 NONOQ15233 471 aaKnown RBP eCLIP16.23■□□□□ 0.195e-10■■■■■ 34.1
CNN2-205ENST00000562958 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 PCMTD1Q96MG8 357 aaPredicted RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 ALS2CR12Q96Q35 445 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 FAM184BQ9ULE4 1060 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 CLSTN1O94985 981 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 CYP2D6P10635 497 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 TCP1P17987 556 aaKnown RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 PLCG1P19174 1290 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 ASIC1P78348 528 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 GSTO1P78417 241 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 DDB1Q16531 1140 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 HEATR3Q7Z4Q2 680 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 DZIP1Q86YF9 867 aaKnown RBP16.23■□□□□ 0.19
CNN2-205ENST00000562958 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 FAM107BQ9H098 131 aa16.23■□□□□ 0.19
CNN2-205ENST00000562958 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms