RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PTPREP23469 700 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 CMA1P23946 247 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 HMGCS2P54868 508 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 FKBP1BP68106 108 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 ATP2C1P98194 919 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 INF2Q27J81 1249 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 USH1GQ495M9 461 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 NOM1Q5C9Z4 860 aaKnown RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
COMMD4-205ENST00000562310 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 MRPL11Q9Y3B7 192 aaKnown RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
COMMD4-205ENST00000562310 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 PIK3CDO00329 1044 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 FOSP01100 380 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-205ENST00000562310 ICAM1P05362 532 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 LIG1P18858 919 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 ZNF445P59923 1031 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 PPIL2Q13356 520 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 GSE1Q14687 1217 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
COMMD4-205ENST00000562310 CCDC174Q6PII3 467 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 DLK2Q6UY11 383 aa16.27■□□□□ 0.2
COMMD4-205ENST00000562310 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-205ENST00000562310 A0A0G2JMZ2 1700 aa16.27■□□□□ 0.19
COMMD4-205ENST00000562310 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-205ENST00000562310 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 CXCL11O14625 94 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
COMMD4-205ENST00000562310 ZBED4O75132 1171 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
COMMD4-205ENST00000562310 MCM7P33993 719 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 SNAP25P60880 206 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 ZNF174Q15697 407 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 RESP18Q5W5W9 173 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-205ENST00000562310 TBCKQ8TEA7 893 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 NUP62CLQ9H1M0 184 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 ELP3Q9H9T3 547 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 TMEM260Q9NX78 707 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 TRPM7Q96QT4 1865 aa16.26■□□□□ 0.19
COMMD4-205ENST00000562310 PRPHP41219 470 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 OAZ1P54368 228 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 PTGDRQ13258 359 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 UBE2SQ16763 222 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 LDLRAD1Q5T700 205 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-205ENST00000562310 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 ANO3Q9BYT9 981 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 EHMT1Q9H9B1 1298 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 CCPG1Q9ULG6 757 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 KCNH4Q9UQ05 1017 aa16.25■□□□□ 0.19
COMMD4-205ENST00000562310 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-205ENST00000562310 SPDYE3A6NKU9 549 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 WNT7AO00755 349 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 CTAGE5O15320 804 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 NR1I2O75469 434 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 DSG3P32926 999 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 COG2Q14746 738 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 LETM2Q2VYF4 491 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-205ENST00000562310 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-205ENST00000562310 ENGASEQ8NFI3 743 aa16.24■□□□□ 0.19
COMMD4-205ENST00000562310 ZNF536O15090 1300 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 GCOM1H8Y6P7 765 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-205ENST00000562310 VWA5AO00534 786 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 MEIS2O14770 477 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 NEMFO60524 1076 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 CCNT1O60563 726 aaKnown RBP16.23■□□□□ 0.19
COMMD4-205ENST00000562310 POLR2MP0CAP2 368 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 PFKFB1P16118 471 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 DGKZQ13574 1117 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 PPP4R3AQ6IN85 833 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 SHC4Q6S5L8 630 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms