RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PPIL2Q13356 520 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 MOGSQ13724 837 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 TTC38Q5R3I4 469 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 C4orf32Q8N8J7 132 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
SNX1-212ENST00000560861 REPS2Q8NFH8 660 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
SNX1-212ENST00000560861 KIFC2Q96AC6 838 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
SNX1-212ENST00000560861 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 NOL7Q9UMY1 257 aaKnown RBP12.92□□□□□ -0.34
SNX1-212ENST00000560861 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
SNX1-212ENST00000560861 A0A0G2JLL6 359 aaPredicted RBP12.91□□□□□ -0.34
SNX1-212ENST00000560861 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 CXCL11O14625 94 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 MEIS2O14770 477 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 ICAM1P05362 532 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 HSPA6P17066 643 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 LIG1P18858 919 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
SNX1-212ENST00000560861 FKBP1BP68106 108 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 TRAF1Q13077 416 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 ADALQ6DHV7 355 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 CATSPERGQ6ZRH7 1159 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 PRRT2Q7Z6L0 340 aaPredicted RBP12.91□□□□□ -0.34
SNX1-212ENST00000560861 CRYGNQ8WXF5 182 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 CUL5Q93034 780 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 GLT8D2Q9H1C3 349 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 TMEM63CQ9P1W3 806 aa12.91□□□□□ -0.34
SNX1-212ENST00000560861 BIN2Q9UBW5 565 aaPredicted RBP12.91□□□□□ -0.34
SNX1-212ENST00000560861 FBXO2Q9UK22 296 aaPredicted RBP12.91□□□□□ -0.34
SNX1-212ENST00000560861 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 IRF6O14896 467 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 ITGBL1O95965 494 aaPredicted RBP12.9□□□□□ -0.34
SNX1-212ENST00000560861 BMP15O95972 392 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 FDX1P10109 184 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 PTPREP23469 700 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 GJA5P36382 358 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 ATP2C1P98194 919 aaPredicted RBP12.9□□□□□ -0.34
SNX1-212ENST00000560861 NONOQ15233 471 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNX1-212ENST00000560861 UBE2SQ16763 222 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 INF2Q27J81 1249 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 TANGO6Q9C0B7 1094 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 GOLPH3LQ9H4A5 285 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 PSTPIP2Q9H939 334 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
SNX1-212ENST00000560861 ABCB11O95342 1321 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 VWA5AO00534 786 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 CUTAO60888 179 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 FLOT1O75955 427 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
SNX1-212ENST00000560861 ME1P48163 572 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 AP3B2Q13367 1082 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
SNX1-212ENST00000560861 ZNF174Q15697 407 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USH1GQ495M9 461 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 CCDC174Q6PII3 467 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 SHC4Q6S5L8 630 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 CLEC4DQ8WXI8 215 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 TMOD4Q9NZQ9 345 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
SNX1-212ENST00000560861 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
SNX1-212ENST00000560861 ATP2A1O14983 1001 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 TOMM70O94826 608 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 CMA1P23946 247 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 HOXA7P31268 230 aaPredicted RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 GRIN1Q05586 938 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 RESP18Q5W5W9 173 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 MCTP2Q6DN12 878 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms