RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CEP95Q96GE4 821 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 C1QTNF1Q9BXJ1 281 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 HOMER2Q9NSB8 354 aa23.62■■□□□ 1.37
RABGGTA-214ENST00000560163 ASB14A6NK59 587 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 MINDY4BA8MYZ0 360 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 FDX1P10109 184 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 TAPT1Q6NXT6 567 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 NOL8Q76FK4 1167 aaKnown RBP23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 ACAD9Q9H845 621 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 ZBTB40Q9NUA8 1239 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 Q9Y3F1 56 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 LRRC37A2A6NM11 1700 aa23.61■■□□□ 1.37
RABGGTA-214ENST00000560163 ERC2O15083 957 aa23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 DYNC1LI2O43237 492 aaPredicted RBP23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 HOXD11P31277 338 aaPredicted RBP23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 KCNQ1P51787 676 aa23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 TMEM63BQ5T3F8 832 aa23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 PDGFCQ9NRA1 345 aa23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 DDX49Q9Y6V7 483 aaKnown RBP23.6■■□□□ 1.37
RABGGTA-214ENST00000560163 TTLL1O95922 423 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 BMP3P12645 472 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 PSMC6P62333 389 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 AAK1Q2M2I8 961 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 IQSEC1Q6DN90 963 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 ZNF444Q8N0Y2 327 aaPredicted RBP23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 LRRC47Q8N1G4 583 aaKnown RBP23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 OSBP2Q969R2 916 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 SCLYQ96I15 445 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 AP5M1Q9H0R1 490 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 EPB41L4AQ9HCS5 686 aaPredicted RBP23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 MTCH2Q9Y6C9 303 aa23.59■■□□□ 1.37
RABGGTA-214ENST00000560163 PRRC2BQ5JSZ5 2229 aaKnown RBP23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 ZEB2O60315 1214 aa23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 PRDM1O75626 825 aa23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 ATP2A2P16615 1042 aaKnown RBP23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 SLFN13Q68D06 897 aa23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 MICALL1Q8N3F8 863 aa23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 ALDH8A1Q9H2A2 487 aaPredicted RBP23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 RNF146Q9NTX7 359 aa23.58■■□□□ 1.37
RABGGTA-214ENST00000560163 TMEM232C9JQI7 657 aa23.57■■□□□ 1.36
RABGGTA-214ENST00000560163 RFXAPO00287 272 aa23.57■■□□□ 1.36
RABGGTA-214ENST00000560163 TTLL4Q14679 1199 aa23.57■■□□□ 1.36
RABGGTA-214ENST00000560163 TKFCQ3LXA3 575 aa23.57■■□□□ 1.36
RABGGTA-214ENST00000560163 COG6Q9Y2V7 657 aa23.57■■□□□ 1.36
RABGGTA-214ENST00000560163 ARIH1Q9Y4X5 557 aaPredicted RBP23.57■■□□□ 1.36
RABGGTA-214ENST00000560163 PLIN4Q96Q06 1357 aa23.56■■□□□ 1.36
RABGGTA-214ENST00000560163 STAT2P52630 851 aa23.56■■□□□ 1.36
RABGGTA-214ENST00000560163 NEDD1Q8NHV4 660 aa23.56■■□□□ 1.36
RABGGTA-214ENST00000560163 MORC4Q8TE76 937 aa23.56■■□□□ 1.36
RABGGTA-214ENST00000560163 TRERF1Q96PN7 1200 aa23.56■■□□□ 1.36
RABGGTA-214ENST00000560163 ZBBXA8MT70 800 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 PLA2G6O60733 806 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 CA3P07451 260 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 PFKMP08237 780 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 TMEM67Q5HYA8 995 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 CHURC1Q8WUH1 139 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 STAG1Q8WVM7 1258 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 GMCL1Q96IK5 515 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 ZNF287Q9HBT7 754 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 CYP39A1Q9NYL5 469 aa23.55■■□□□ 1.36
RABGGTA-214ENST00000560163 EPOPA6NHQ4 379 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 EEPD1Q7L9B9 569 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 FBXO16Q8IX29 292 aaPredicted RBP23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 KBTBD3Q8NAB2 608 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 APPBP2Q92624 585 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 LRFN3Q9BTN0 628 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 EPHX3Q9H6B9 360 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 TRMT13Q9NUP7 481 aaKnown RBP23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 LCTP09848 1927 aa23.54■■□□□ 1.36
RABGGTA-214ENST00000560163 TLL1O43897 1013 aa23.53■■□□□ 1.36
RABGGTA-214ENST00000560163 CYP2C9P11712 490 aa23.53■■□□□ 1.36
RABGGTA-214ENST00000560163 MUM1L1Q5H9M0 696 aa23.53■■□□□ 1.36
RABGGTA-214ENST00000560163 VTA1Q9NP79 307 aa23.53■■□□□ 1.36
RABGGTA-214ENST00000560163 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
RABGGTA-214ENST00000560163 SCN5AQ14524 2016 aa23.53■■□□□ 1.36
RABGGTA-214ENST00000560163 RNF113AO15541 343 aaKnown RBP23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 GPAA1O43292 621 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 SUPT20HL2P0C7V6 817 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 MS4A1P11836 297 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 ALAS1P13196 640 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 DUSP28Q4G0W2 176 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 KRT40Q6A162 431 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 PURBQ96QR8 312 aaKnown RBP23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 COG5Q9UP83 839 aa23.52■■□□□ 1.36
RABGGTA-214ENST00000560163 PATL2C9JE40 543 aaKnown RBP23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 ARHGEF15O94989 841 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 GNAT2P19087 354 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 TDO2P48775 406 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 PURAQ00577 322 aaKnown RBP23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 SKIV2LQ15477 1246 aaKnown RBP23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 KIAA1211Q6ZU35 1233 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 IFNL3Q8IZI9 196 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 PHOSPHO2Q8TCD6 241 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 LRRCC1Q9C099 1032 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 CERS4Q9HA82 394 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 ECHDC1Q9NTX5 307 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 TNKSO95271 1327 aa23.51■■□□□ 1.35
RABGGTA-214ENST00000560163 M0R2C6 588 aa23.5■■□□□ 1.35
RABGGTA-214ENST00000560163 GTPBP6O43824 516 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms