RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NOL6Q9H6R4 1146 aaKnown RBP5.28□□□□□ -1.56
CASC4-210ENST00000559550 C19orf44Q9H6X5 657 aa5.28□□□□□ -1.56
CASC4-210ENST00000559550 ST7Q9NRC1 585 aa5.28□□□□□ -1.56
CASC4-210ENST00000559550 WHRNQ9P202 907 aa5.28□□□□□ -1.56
CASC4-210ENST00000559550 DDAH1O94760 285 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 SASH1O94885 1247 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 GJB6O95452 261 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 GSNP06396 782 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 VAV1P15498 845 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 PPP2R5DQ14738 602 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 NCAPHQ15003 741 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 TCEAL1Q15170 157 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 WAPLQ7Z5K2 1190 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 ADAT2Q7Z6V5 191 aaKnown RBP5.27□□□□□ -1.57
CASC4-210ENST00000559550 LINC01599Q8WXQ3 324 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 DHX38Q92620 1227 aaKnown RBP5.27□□□□□ -1.57
CASC4-210ENST00000559550 DACT3Q96B18 629 aaPredicted RBP5.27□□□□□ -1.57
CASC4-210ENST00000559550 ZDHHC15Q96MV8 337 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 LGR4Q9BXB1 951 aa5.27□□□□□ -1.57
CASC4-210ENST00000559550 A0A087WZG4 1122 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 SSU72P8A0A1W2PR75 194 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 ANKRD34BA5PLL1 514 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 RFXAPO00287 272 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 SUV39H1O43463 412 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 EFEMP2O95967 443 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 ATP2B1P20020 1258 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 CEBPAP49715 358 aaPredicted RBP5.26□□□□□ -1.57
CASC4-210ENST00000559550 FXNQ16595 210 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 RTP2Q5QGT7 225 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 LILRA2Q8N149 483 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 INTS4Q96HW7 963 aaKnown RBP5.26□□□□□ -1.57
CASC4-210ENST00000559550 MCMBPQ9BTE3 642 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 SLC12A9Q9BXP2 914 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 GBP3Q9H0R5 595 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 AP5S1Q9NUS5 200 aa5.26□□□□□ -1.57
CASC4-210ENST00000559550 CGGBP1Q9UFW8 167 aaPredicted RBP5.26□□□□□ -1.57
CASC4-210ENST00000559550 NOTOA8MTQ0 251 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 VAMP4O75379 141 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 PPM1BO75688 479 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 STK10O94804 968 aaKnown RBP5.25□□□□□ -1.57
CASC4-210ENST00000559550 INSRRP14616 1297 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 IFNGR1P15260 489 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 PI3P19957 117 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 GTF2F1P35269 517 aaKnown RBP eCLIP5.25□□□□□ -1.57
CASC4-210ENST00000559550 RAB33AQ14088 237 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 DDR2Q16832 855 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 ARHGEF39Q8N4T4 335 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 PDZD8Q8NEN9 1154 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 CDADC1Q9BWV3 514 aa5.25□□□□□ -1.57
CASC4-210ENST00000559550 EPB41L4AQ9HCS5 686 aaPredicted RBP5.25□□□□□ -1.57
CASC4-210ENST00000559550 DIS3Q9Y2L1 958 aaKnown RBP5.25□□□□□ -1.57
CASC4-210ENST00000559550 YBX2Q9Y2T7 364 aaKnown RBP5.25□□□□□ -1.57
CASC4-210ENST00000559550 AKAP8O43823 692 aaKnown RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 SUSD5O60279 629 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 USP2O75604 605 aaPredicted RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 CD3EP07766 207 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 GSTM1P09488 218 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 NR0B2Q15466 257 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 CWF19L1Q69YN2 538 aaKnown RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 TMEM52Q8NDY8 209 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 RCC1LQ96I51 464 aaKnown RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 MAP6Q96JE9 813 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 HHIPL1Q96JK4 782 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 TEPSINQ96N21 525 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 FCRL3Q96P31 734 aaPredicted RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 APBA2Q99767 749 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 CWC22Q9HCG8 908 aaKnown RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 ERVK13-1Q9NX77 482 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 ZMYM5Q9UJ78 669 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 MYRFQ9Y2G1 1151 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 SUGT1Q9Y2Z0 365 aa5.24□□□□□ -1.57
CASC4-210ENST00000559550 SF3B6Q9Y3B4 125 aaKnown RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 R3HCC1Q9Y3T6 440 aaKnown RBP5.24□□□□□ -1.57
CASC4-210ENST00000559550 TBX1O43435 398 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 GALK1P51570 392 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 AFF3P51826 1226 aaKnown RBP5.23□□□□□ -1.57
CASC4-210ENST00000559550 ZNF143P52747 638 aaPredicted RBP5.23□□□□□ -1.57
CASC4-210ENST00000559550 DUSP4Q13115 394 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 PUM1Q14671 1186 aaKnown RBP eCLIP5.23□□□□□ -1.57
CASC4-210ENST00000559550 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 ZDHHC14Q8IZN3 488 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 BVESQ8NE79 360 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 PPP1R14AQ96A00 147 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 SYTL4Q96C24 671 aaPredicted RBP5.23□□□□□ -1.57
CASC4-210ENST00000559550 SHISA4Q96DD7 197 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 FCRL2Q96LA5 508 aaPredicted RBP5.23□□□□□ -1.57
CASC4-210ENST00000559550 EMC9Q9Y3B6 208 aa5.23□□□□□ -1.57
CASC4-210ENST00000559550 FADS2P1A8MWK0 482 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 STXBP3O00186 592 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 ITGAVP06756 1048 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 POU4F1Q01851 419 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 KIR3DS1Q14943 382 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 SLC10A6Q3KNW5 377 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 ERICH6BQ5W0A0 696 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 TMEM132EQ6IEE7 984 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 ZNF227Q86WZ6 799 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 CKAP2LQ8IYA6 745 aa5.22□□□□□ -1.57
CASC4-210ENST00000559550 SREK1Q8WXA9 508 aaKnown RBP5.22□□□□□ -1.57
CASC4-210ENST00000559550 MRGPRX3Q96LB0 322 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms