RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MYH7BA7E2Y1 1941 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 ESYT2A0FGR8 921 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 CCP110O43303 1012 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 KLRC4O43908 158 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 STX10O60499 249 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 TTLL1O95922 423 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 KCNA3P22001 575 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
SPG11-217ENST00000559511 KRT31Q15323 416 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 SYCP1Q15431 976 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 TRIM65Q6PJ69 517 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 FCHSD1Q86WN1 690 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 TTLL6Q8N841 843 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 KBTBD4Q9NVX7 518 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 PPP2R2CQ9Y2T4 447 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 COL4A5P29400 1685 aa12.46□□□□□ -0.41
SPG11-217ENST00000559511 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.42
SPG11-217ENST00000559511 FANCGO15287 622 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 HLA-DOAP06340 250 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 PLCG1P19174 1290 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 CCT6AP40227 531 aaKnown RBP12.46□□□□□ -0.42
SPG11-217ENST00000559511 ETF1P62495 437 aaKnown RBP12.46□□□□□ -0.42
SPG11-217ENST00000559511 TCP10Q12799 353 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 KMT5BQ4FZB7 885 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 IDI2Q9BXS1 227 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 EHD4Q9H223 541 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 FAM198AQ9UFP1 575 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.42
SPG11-217ENST00000559511 TRIM49BA6NDI0 452 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 DPEP1P16444 411 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 TECP42680 631 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 RBL2Q08999 1139 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 CABP7Q86V35 215 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 SLC16A10Q8TF71 515 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 AK8Q96MA6 479 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 DNAJC18Q9H819 358 aa12.45□□□□□ -0.42
SPG11-217ENST00000559511 LIMA1Q9UHB6 759 aaKnown RBP12.45□□□□□ -0.42
SPG11-217ENST00000559511 DDTLA6NHG4 134 aaPredicted RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 LRRC10BA6NIK2 292 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 AKR1B15C9JRZ8 316 aaPredicted RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 EDIL3O43854 480 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 PPP1R11O60927 126 aaPredicted RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 PMS1P54277 932 aaKnown RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 KCNB1Q14721 858 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 SH3BP5LQ7L8J4 393 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 ADSSL1Q8N142 457 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 CPLX3Q8WVH0 158 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 L2HGDHQ9H9P8 463 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 JMJD4Q9H9V9 463 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPG11-217ENST00000559511 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 V9GYY5 206 aaPredicted RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 KCNJ18B7U540 433 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 ZSCAN12O43309 604 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 TUBB4AP04350 444 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 ADCY7P51828 1080 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 KCNJ12Q14500 433 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 MTF1Q14872 753 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 FILIP1LQ4L180 1135 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 TCP11X2Q5H9J9 407 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 ADGRF4Q8IZF3 695 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 DESI2Q9BSY9 194 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 MMTAG2Q9BU76 263 aaKnown RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 DHX36Q9H2U1 1008 aaKnown RBP12.44□□□□□ -0.42
SPG11-217ENST00000559511 PHLPP2Q6ZVD8 1323 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
SPG11-217ENST00000559511 SOWAHDA6NJG2 315 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 SLC37A4O43826 429 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
SPG11-217ENST00000559511 RHOBTB3O94955 611 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 GYPCP04921 128 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 MYL1P05976 194 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 SLC16A2P36021 539 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 COPB1P53618 953 aaKnown RBP12.43□□□□□ -0.42
SPG11-217ENST00000559511 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
SPG11-217ENST00000559511 PPFIBP1Q86W92 1011 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 LRRN4CLQ8ND94 238 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 PSMD1Q99460 953 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 VPS16Q9H269 839 aa12.43□□□□□ -0.42
SPG11-217ENST00000559511 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
SPG11-217ENST00000559511 TAB2Q9NYJ8 693 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms