RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 LINC01553A4QN01 128 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 AKR1B1P15121 316 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 BRDTQ58F21 947 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-211ENST00000559460 RNF135Q8IUD6 432 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 FBXL6Q8N531 539 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 BANK1Q8NDB2 785 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 REPS2Q8NFH8 660 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMAD3-211ENST00000559460 SMC4Q9NTJ3 1288 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 GNEQ9Y223 722 aaKnown RBP11.68□□□□□ -0.54
SMAD3-211ENST00000559460 Q9Y3F1 56 aa11.68□□□□□ -0.54
SMAD3-211ENST00000559460 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-211ENST00000559460 NCK2O43639 380 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 EFCAB14O75071 495 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 GJB5O95377 273 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 MYL3P08590 195 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 EEF2P13639 858 aaKnown RBP11.67□□□□□ -0.54
SMAD3-211ENST00000559460 CPT1AP50416 773 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 FAM117BQ6P1L5 589 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 TMCO2Q7Z6W1 182 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-211ENST00000559460 PRPF38AQ8NAV1 312 aaKnown RBP11.67□□□□□ -0.54
SMAD3-211ENST00000559460 MEIS3Q99687 375 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 DBNDD2Q9BQY9 259 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 HOMER2Q9NSB8 354 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 RIPK3Q9Y572 518 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
SMAD3-211ENST00000559460 ZNF318Q5VUA4 2279 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 RAD50Q92878 1312 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 PARP14Q460N5 1801 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 USP17L21D6R901 530 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 KDM4AO75164 1064 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 SMPD1P17405 629 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 DEFB103AP81534 67 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 TNNI3KQ59H18 835 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 CNKSR3Q6P9H4 555 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-211ENST00000559460 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 MTG1Q9BT17 334 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-211ENST00000559460 API5Q9BZZ5 524 aaKnown RBP11.66□□□□□ -0.54
SMAD3-211ENST00000559460 KATNBL1Q9H079 304 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 NSUN3Q9H649 340 aaKnown RBP11.66□□□□□ -0.54
SMAD3-211ENST00000559460 RAVER2Q9HCJ3 691 aaKnown RBP11.66□□□□□ -0.54
SMAD3-211ENST00000559460 FPGT-TNNI3KV9GXZ4 949 aa11.66□□□□□ -0.54
SMAD3-211ENST00000559460 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 STXBP3O00186 592 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 PARNO95453 639 aaKnown RBP11.65□□□□□ -0.54
SMAD3-211ENST00000559460 CHMP4BP1P59074 171 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 CNTN2Q02246 1040 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 MTX1Q13505 466 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 CLUL1Q15846 466 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 TCEAL5Q5H9L2 206 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 EEPD1Q7L9B9 569 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 SIAH1Q8IUQ4 282 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 CAGE1Q8TC20 777 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 FGD4Q96M96 766 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 C17orf80Q9BSJ5 609 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 ACAD9Q9H845 621 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 GPR108Q9NPR9 543 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
SMAD3-211ENST00000559460 INSL6Q9Y581 213 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 SCN5AQ14524 2016 aa11.65□□□□□ -0.54
SMAD3-211ENST00000559460 TANC1Q9C0D5 1861 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 ABHD14A-ACY1A0A1B0GW23 586 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
SMAD3-211ENST00000559460 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-211ENST00000559460 IKBKEQ14164 716 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 SMAD2Q15796 467 aaKnown RBP11.64□□□□□ -0.55
SMAD3-211ENST00000559460 NFRKBQ6P4R8 1299 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.64□□□□□ -0.555e-7■□□□□ 8.1
SMAD3-211ENST00000559460 RPAINQ86UA6 219 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-211ENST00000559460 AFAP1L1Q8TED9 768 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 SDR42E1Q8WUS8 393 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-211ENST00000559460 MRS2Q9HD23 443 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 TRPC6Q9Y210 931 aa11.64□□□□□ -0.55
SMAD3-211ENST00000559460 SIP14410 1827 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 H0Y858 1186 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 CYP2D6P10635 497 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 OAZ1P54368 228 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 GPM6BQ13491 265 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 CCDC184Q52MB2 194 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 LRRC8DQ7L1W4 858 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 OR6J1Q8NGC5 347 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms