RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 FOXN1O15353 648 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 EDIL3O43854 480 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 CELF2O95319 508 aaKnown RBP14.75□□□□□ -0.05
SMAD3-207ENST00000558763 ITGBL1O95965 494 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-207ENST00000558763 MCM7P33993 719 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 VGLL4Q14135 290 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 CCDC96Q2M329 555 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 DPCR1Q3MIW9 517 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 SLFN13Q68D06 897 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 COA7Q96BR5 231 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 EPSTI1Q96J88 318 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
SMAD3-207ENST00000558763 POLR2DO15514 142 aaKnown RBP14.74□□□□□ -0.05
SMAD3-207ENST00000558763 NDUFB10O96000 172 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 PNOCQ13519 176 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-207ENST00000558763 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
SMAD3-207ENST00000558763 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
SMAD3-207ENST00000558763 GMCL1Q96IK5 515 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 TMEM60Q9H2L4 133 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 PICK1Q9NRD5 415 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 ANO10Q9NW15 660 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 F5H6K3 240 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 ZBTB5O15062 677 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 RAD21O60216 631 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 ADCY5O95622 1261 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 GNA11P29992 359 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 ECE1P42892 770 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 MAP3K9P80192 1104 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 KLRC3Q07444 240 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 ARL6IP4Q66PJ3 421 aaKnown RBP14.74□□□□□ -0.05
SMAD3-207ENST00000558763 PPP1R18Q6NYC8 613 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 KRT25Q7Z3Z0 450 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 CLMNQ96JQ2 1002 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 C6orf50Q9HD87 102 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 FAM13BQ9NYF5 915 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 SYNPO2Q9UMS6 1093 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 CSADQ9Y600 493 aa14.74□□□□□ -0.05
SMAD3-207ENST00000558763 VWA3AA6NCI4 1184 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 SLC1A4P43007 532 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 CLK2P49760 499 aaKnown RBP14.73□□□□□ -0.05
SMAD3-207ENST00000558763 KIAA1755Q5JYT7 1200 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 ACER1Q8TDN7 264 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 NUP88Q99567 741 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-207ENST00000558763 SERTAD1Q9UHV2 236 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 SNCAIPQ9Y6H5 919 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 ZYXQ15942 572 aaKnown RBP14.73□□□□□ -0.05
SMAD3-207ENST00000558763 E2F4Q16254 413 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 ANKRD13AQ8IZ07 590 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 REXO1Q8N1G1 1221 aaKnown RBP14.73□□□□□ -0.05
SMAD3-207ENST00000558763 SMC1BQ8NDV3 1235 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 CNNM3Q8NE01 707 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 ELP3Q9H9T3 547 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 ARHGEF10LQ9HCE6 1279 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 GBA2Q9HCG7 927 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-207ENST00000558763 TMEM260Q9NX78 707 aa14.73□□□□□ -0.05
SMAD3-207ENST00000558763 TRPM7Q96QT4 1865 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 PTPRAP18433 802 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 BMP6P22004 513 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 NLRP12P59046 1061 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMAD3-207ENST00000558763 QRICH1Q2TAL8 776 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 NOL9Q5SY16 702 aaKnown RBP14.72□□□□□ -0.05
SMAD3-207ENST00000558763 NT5DC1Q5TFE4 455 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 SH3RF1Q7Z6J0 888 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 PDILTQ8N807 584 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 FEZ1Q99689 392 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 RIC8AQ9NPQ8 531 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 BIN2Q9UBW5 565 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-207ENST00000558763 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
SMAD3-207ENST00000558763 BIN1O00499 593 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 TOMM70O94826 608 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 ADCY7P51828 1080 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 HS1BP3Q53T59 392 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 CST9Q5W186 159 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 BTNL9Q6UXG8 535 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 SPATA20Q8TB22 786 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 BPIFA3Q9BQP9 254 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 GINM1Q9NU53 330 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 PCDHA5Q9Y5H7 936 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 PHIPQ8WWQ0 1821 aa14.71□□□□□ -0.05
SMAD3-207ENST00000558763 SARSP49591 514 aaKnown RBP14.71□□□□□ -0.06
SMAD3-207ENST00000558763 DGKZQ13574 1117 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 POSTNQ15063 836 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 CDC37Q16543 378 aaPredicted RBP14.71□□□□□ -0.06
SMAD3-207ENST00000558763 JAKMIP3Q5VZ66 844 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 CEP57L1Q8IYX8 460 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 C2orf69Q8N8R5 385 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 TBCKQ8TEA7 893 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 RRAGDQ9NQL2 400 aaPredicted RBP14.71□□□□□ -0.06
SMAD3-207ENST00000558763 TMX2Q9Y320 296 aa14.71□□□□□ -0.06
SMAD3-207ENST00000558763 PASKQ96RG2 1323 aa14.7□□□□□ -0.06
SMAD3-207ENST00000558763 PRPHP41219 470 aa14.7□□□□□ -0.06
SMAD3-207ENST00000558763 SPP2Q13103 211 aa14.7□□□□□ -0.06
SMAD3-207ENST00000558763 NEK8Q86SG6 692 aa14.7□□□□□ -0.06
SMAD3-207ENST00000558763 SPICE1Q8N0Z3 855 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms