RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	UTP14A	Q9BVJ6	771 aa	Known RBP	6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	KRTAP9-9	Q9BYP9	154 aa		6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	KRTAP9-4	Q9BYQ2	154 aa		6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	PRO3102	Q9H379	93 aa		6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	KCNQ5	Q9NR82	932 aa		6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	GGA3	Q9NZ52	723 aa		6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	AKAP11	Q9UKA4	1901 aa		6.27	□□□□□ -1.41
SCFD1-223	ENST00000557076	ABCC4	O15439	1325 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	UBN2	Q6ZU65	1347 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	UNC80	Q8N2C7	3258 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076		A6NHS1	94 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	PHACTR2	O75167	634 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	TIAF1	O95411	115 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	GPT	P24298	496 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	USP5	P45974	858 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	SGO2	Q562F6	1265 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	ANGEL2	Q5VTE6	544 aa	Known RBP	6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	MOB2	Q70IA6	237 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	VN1R5	Q7Z5H4	357 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	C12orf50	Q8NA57	414 aa	Predicted RBP	6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	AGBL3	Q8NEM8	1001 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	ERO1A	Q96HE7	468 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	ZNF333	Q96JL9	665 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	ZKSCAN3	Q9BRR0	538 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	METTL22	Q9BUU2	404 aa	Predicted RBP	6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	USP26	Q9BXU7	913 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	OSBPL1A	Q9BXW6	950 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	LEMD3	Q9Y2U8	911 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	KNSTRN	Q9Y448	316 aa		6.26	□□□□□ -1.41
SCFD1-223	ENST00000557076	ASTN2	O75129	1339 aa	Predicted RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	LOC100289279	A0A1B0GTE1	492 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076		A0A1W2PPC1	479 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	MANSC4	A6NHS7	340 aa	Predicted RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	EREG	O14944	169 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	TCIRG1	Q13488	830 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	GRAP	Q13588	217 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	ARHGEF6	Q15052	776 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	TAF7	Q15545	349 aa	Predicted RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	EXOSC6	Q5RKV6	272 aa	Known RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	LDLRAD1	Q5T700	205 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	PAOX	Q6QHF9	649 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	KIF6	Q6ZMV9	814 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	TTLL7	Q6ZT98	887 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	DDX46	Q7L014	1031 aa	Known RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	NGEF	Q8N5V2	710 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	GRAPL	Q8TC17	118 aa	Predicted RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	GML	Q99445	158 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	POLR3GL	Q9BT43	218 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	YIPF2	Q9BWQ6	316 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	POLL	Q9UGP5	575 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	ANGEL1	Q9UNK9	670 aa	Known RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	BCOR	Q6W2J9	1755 aa		6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	POLR2A	P24928	1970 aa	Known RBP	6.25	□□□□□ -1.41
SCFD1-223	ENST00000557076	SCN7A	Q01118	1682 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	VCAN	P13611	3396 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	RTL9	Q8NET4	1388 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	FAM95C	A0A1B0GW59	222 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	UNCX	A6NJT0	531 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	HTATSF1	O43719	755 aa	Known RBP	6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	ECE2	O60344	883 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	TNFRSF21	O75509	655 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	F13B	P05160	661 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	FOSL1	P15407	271 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	NF2	P35240	595 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	PTPN12	Q05209	780 aa	Known RBP	6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	SLC4A8	Q2Y0W8	1093 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	HGSNAT	Q68CP4	663 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	OTUD7B	Q6GQQ9	843 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	ARMC9	Q7Z3E5	817 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	ASAP3	Q8TDY4	903 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	RTF1	Q92541	710 aa	Known RBP	6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	DPF3	Q92784	378 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	PHACTR3	Q96KR7	559 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	EYA3	Q99504	573 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	DBNDD1	Q9H9R9	158 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	ADGRE2	Q9UHX3	823 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	POLI	Q9UNA4	740 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	MTMR7	Q9Y216	660 aa		6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	RRP7A	Q9Y3A4	280 aa	Known RBP	6.24	□□□□□ -1.41
SCFD1-223	ENST00000557076	FAM13A	O94988	1023 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	ESRRA	P11474	423 aa	Predicted RBP	6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	HCLS1	P14317	486 aa	Predicted RBP	6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	NPR3	P17342	541 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	MMP14	P50281	582 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	USP11	P51784	963 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	SP3	Q02447	781 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	AAMP	Q13685	434 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	MSMP	Q1L6U9	139 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	PRAMEF18	Q5VWM3	479 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	FBXL6	Q8N531	539 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	MYOZ2	Q9NPC6	264 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	UBR2	Q8IWV8	1755 aa		6.23	□□□□□ -1.41
SCFD1-223	ENST00000557076	U2SURP	O15042	1029 aa	Known RBP	6.22	□□□□□ -1.41
SCFD1-223	ENST00000557076	PRNP	P04156	253 aa		6.22	□□□□□ -1.41
SCFD1-223	ENST00000557076	ZBTB48	P10074	688 aa	Predicted RBP	6.22	□□□□□ -1.41
SCFD1-223	ENST00000557076	GPSM2	P81274	684 aa		6.22	□□□□□ -1.41

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