RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 STX17P56962 302 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 KRT81Q14533 505 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 MFSD14CQ5VZR4 134 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 KCNH4Q9UQ05 1017 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
NEK9-210ENST00000557026 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 GARSP41250 739 aaKnown RBP13.13□□□□□ -0.31
NEK9-210ENST00000557026 BCAMP50895 628 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 PSMD2Q13200 908 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 CFAP221Q4G0U5 840 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
NEK9-210ENST00000557026 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
NEK9-210ENST00000557026 AMFRQ9UKV5 643 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 I3L4J1 428 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 POLR2DO15514 142 aaKnown RBP13.13□□□□□ -0.31
NEK9-210ENST00000557026 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
NEK9-210ENST00000557026 ANXA13P27216 316 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 PTK2Q05397 1052 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 PRR16Q569H4 304 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 KRT222Q8N1A0 295 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 PPFIBP2Q8ND30 876 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 PAIP2Q9BPZ3 127 aaKnown RBP13.13□□□□□ -0.31
NEK9-210ENST00000557026 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 PAK2Q13177 524 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 C8orf74Q6P047 294 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 SNX25Q9H3E2 840 aa13.13□□□□□ -0.31
NEK9-210ENST00000557026 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 HEXIM1O94992 359 aaKnown RBP13.12□□□□□ -0.31
NEK9-210ENST00000557026 LACTBP83111 547 aaPredicted RBP13.12□□□□□ -0.31
NEK9-210ENST00000557026 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 ELMOD1Q8N336 334 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 HAUS8Q9BT25 410 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 BZW1Q7L1Q6 419 aaKnown RBP13.12□□□□□ -0.31
NEK9-210ENST00000557026 HDXQ7Z353 690 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 NELFBQ8WX92 580 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 MAP3K4Q9Y6R4 1608 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 ZNF202O95125 648 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 GYG1P46976 350 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 CCDC121Q6ZUS5 278 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 NT5C1BQ96P26 610 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 VCXQ9H320 206 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 USP17L2Q6R6M4 530 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 INTS8Q75QN2 995 aaKnown RBP13.12□□□□□ -0.31
NEK9-210ENST00000557026 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 AFF2P51816 1311 aa13.12□□□□□ -0.31
NEK9-210ENST00000557026 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 CDKL2Q92772 493 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 IRX4P78413 519 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 CCHCR1Q8TD31 782 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 RSAD2Q8WXG1 361 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 WDR64B1ANS9 1081 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 S100BP04271 92 aaPredicted RBP13.11□□□□□ -0.31
NEK9-210ENST00000557026 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
NEK9-210ENST00000557026 ZMYM1Q5SVZ6 1142 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 PEX26Q7Z412 305 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 PANK4Q9NVE7 773 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 ESYT2A0FGR8 921 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 TERF1P54274 439 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 TRIM58Q8NG06 486 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 RFX7Q2KHR2 1363 aa13.11□□□□□ -0.31
NEK9-210ENST00000557026 A6NJR5 290 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 HSPA6P17066 643 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
NEK9-210ENST00000557026 CPLX4Q7Z7G2 160 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 PALM2Q8IXS6 379 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
NEK9-210ENST00000557026 ASIC3Q9UHC3 531 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
NEK9-210ENST00000557026 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms