RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PLA2G4DQ86XP0 818 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 TTC39CQ8N584 583 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 MYRIPQ8NFW9 859 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 ORAI2Q96SN7 254 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 PLIN2Q99541 437 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 SLC12A6Q9UHW9 1150 aa11.75□□□□□ -0.53
ACTN1-216ENST00000556083 MED7O43513 233 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 KRT19P08727 400 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 KRT3P12035 628 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 KRT81Q14533 505 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 XKR9Q5GH70 373 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 PALM2Q8IXS6 379 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 TNNQ9UQP3 1299 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 RGS16O15492 202 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 MORC3Q14149 939 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 LONRF2Q1L5Z9 754 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 BZW1Q7L1Q6 419 aaKnown RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 NT5C1BQ96P26 610 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 TUBB6Q9BUF5 446 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 MXD3Q9BW11 206 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 TTLL1O95922 423 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 NSFP46459 744 aaKnown RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 ARMCX5Q6P1M9 558 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 SLC7A3Q8WY07 619 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 MRPL47Q9HD33 250 aaKnown RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 PANK4Q9NVE7 773 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 KLHL14Q9P2G3 628 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 ZMYM1Q5SVZ6 1142 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 METTL23Q86XA0 190 aa11.74□□□□□ -0.53
ACTN1-216ENST00000556083 SMAP1Q8IYB5 467 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-216ENST00000556083 IGSF1Q8N6C5 1336 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 KRT24Q2M2I5 525 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 PRDM1O75626 825 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 PFKFB1P16118 471 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 RPS6KA2Q15349 733 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-216ENST00000556083 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.53
ACTN1-216ENST00000556083 KRT12Q99456 494 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 SH3GLB2Q9NR46 395 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 PNMA3Q9UL41 463 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 RFX7Q2KHR2 1363 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 BUB1BO60566 1050 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-216ENST00000556083 SIK1P57059 783 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 CCDC38Q502W7 563 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
ACTN1-216ENST00000556083 MIS18BP1Q6P0N0 1132 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 RTKN2Q8IZC4 609 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 ACCSQ96QU6 501 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 RPS6KC1Q96S38 1066 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 FBXO40Q9UH90 709 aa11.73□□□□□ -0.53
ACTN1-216ENST00000556083 PPARGP37231 505 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 POLGP54098 1239 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 CTDSPL2Q05D32 466 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 DYMQ7RTS9 669 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 CEP57Q86XR8 500 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 LSM14BQ9BX40 385 aaKnown RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 AP5M1Q9H0R1 490 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 DAAM1Q9Y4D1 1078 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 K7ENM7 598 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 ADRA2BP18089 450 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 STX2P32856 288 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 PSMC2P35998 433 aaKnown RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 BTDP43251 543 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 SLC39A14Q15043 492 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 ANKRD36BP1Q96IX9 119 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 SERTAD1Q9UHV2 236 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 LIFRP42702 1097 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 ADCY9O60503 1353 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 WDR19Q8NEZ3 1342 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 SMIM23A6NLE4 172 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 TAF5LO75529 589 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 FKBP3Q00688 224 aaKnown RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 CASC4Q6P4E1 433 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 NCOA5Q9HCD5 579 aaKnown RBP11.72□□□□□ -0.53
ACTN1-216ENST00000556083 KIAA1586Q9HCI6 787 aa11.72□□□□□ -0.53
ACTN1-216ENST00000556083 ZNF215Q9UL58 517 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms