RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SORCS2Q96PQ0 1159 aa6.74□□□□□ -1.33
SNX6-204ENST00000555541 MVKQ03426 396 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 LRRFIP1Q32MZ4 808 aaKnown RBP6.73□□□□□ -1.33
SNX6-204ENST00000555541 CRTC3Q6UUV7 619 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 LSRQ86X29 649 aaPredicted RBP6.73□□□□□ -1.33
SNX6-204ENST00000555541 ZNF526Q8TF50 670 aaPredicted RBP6.73□□□□□ -1.33
SNX6-204ENST00000555541 SLC12A9Q9BXP2 914 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 SMPD4Q9NXE4 827 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 SUSD2Q9UGT4 822 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 PCDHB12Q9Y5F1 795 aa6.73□□□□□ -1.33
SNX6-204ENST00000555541 ZNF165P49910 485 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 FOXO4P98177 505 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 C7orf61Q8IZ16 206 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 NUP43Q8NFH3 380 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 NKD1Q969G9 470 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 LNPKQ9C0E8 428 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 MKRN2Q9H000 416 aaKnown RBP6.72□□□□□ -1.33
SNX6-204ENST00000555541 IMPACTQ9P2X3 320 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 SUCOQ9UBS9 1254 aaKnown RBP6.72□□□□□ -1.33
SNX6-204ENST00000555541 HCFC2Q9Y5Z7 792 aa6.72□□□□□ -1.33
SNX6-204ENST00000555541 PDIA4P13667 645 aaKnown RBP6.71□□□□□ -1.34
SNX6-204ENST00000555541 PFKLP17858 780 aa6.71□□□□□ -1.34
SNX6-204ENST00000555541 MCM4P33991 863 aa6.71□□□□□ -1.34
SNX6-204ENST00000555541 NR1I3Q14994 352 aa6.71□□□□□ -1.34
SNX6-204ENST00000555541 ZC3H14Q6PJT7 736 aaKnown RBP6.71□□□□□ -1.34
SNX6-204ENST00000555541 CDADC1Q9BWV3 514 aa6.71□□□□□ -1.34
SNX6-204ENST00000555541 SRRTQ9BXP5 876 aaKnown RBP6.71□□□□□ -1.34
SNX6-204ENST00000555541 FBXL21Q9UKT6 434 aa6.71□□□□□ -1.34
SNX6-204ENST00000555541 ENDOUP21128 410 aaKnown RBP6.7□□□□□ -1.34
SNX6-204ENST00000555541 CCDC27Q2M243 656 aa6.7□□□□□ -1.34
SNX6-204ENST00000555541 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
SNX6-204ENST00000555541 CPZQ66K79 652 aa6.7□□□□□ -1.34
SNX6-204ENST00000555541 PPFIBP1Q86W92 1011 aa6.7□□□□□ -1.34
SNX6-204ENST00000555541 SCAND2PQ9GZW5 306 aaPredicted RBP6.7□□□□□ -1.34
SNX6-204ENST00000555541 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
SNX6-204ENST00000555541 SRGAP3O43295 1099 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 GSNP06396 782 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 ZNF20P17024 532 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 CNR2P34972 360 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 ITGAEP38570 1179 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 TARBP2Q15633 366 aaKnown RBP6.69□□□□□ -1.34
SNX6-204ENST00000555541 Q8N1X5 172 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 SRRDQ9UH36 339 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 ZNRF3Q9ULT6 936 aa6.69□□□□□ -1.34
SNX6-204ENST00000555541 FSHBP01225 129 aa6.68□□□□□ -1.34
SNX6-204ENST00000555541 DBHP09172 617 aa6.68□□□□□ -1.34
SNX6-204ENST00000555541 ZNF445P59923 1031 aa6.68□□□□□ -1.34
SNX6-204ENST00000555541 TAB3Q8N5C8 712 aaPredicted RBP6.68□□□□□ -1.34
SNX6-204ENST00000555541 TTC9BQ8N6N2 239 aa6.68□□□□□ -1.34
SNX6-204ENST00000555541 DDX1Q92499 740 aaKnown RBP6.68□□□□□ -1.34
SNX6-204ENST00000555541 GZF1Q9H116 711 aaPredicted RBP6.68□□□□□ -1.34
SNX6-204ENST00000555541 PMF1-BGLAPU3KQ54 211 aa6.68□□□□□ -1.34
SNX6-204ENST00000555541 H0Y8X5 98 aa6.67□□□□□ -1.34
SNX6-204ENST00000555541 FGF10O15520 208 aaPredicted RBP6.67□□□□□ -1.34
SNX6-204ENST00000555541 SLPIP03973 132 aa6.67□□□□□ -1.34
SNX6-204ENST00000555541 PMS1P54277 932 aaKnown RBP6.67□□□□□ -1.34
SNX6-204ENST00000555541 AXDND1Q5T1B0 1012 aaPredicted RBP6.67□□□□□ -1.34
SNX6-204ENST00000555541 DCAF15Q66K64 600 aa6.67□□□□□ -1.34
SNX6-204ENST00000555541 CARFQ8N187 725 aa6.67□□□□□ -1.34
SNX6-204ENST00000555541 DHRS1Q96LJ7 313 aa6.67□□□□□ -1.34
SNX6-204ENST00000555541 SSBP3Q9BWW4 388 aaPredicted RBP6.67□□□□□ -1.34
SNX6-204ENST00000555541 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
SNX6-204ENST00000555541 FAM86C2PA6NEL3 165 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 CYBBP04839 570 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 GSTM1P09488 218 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 ZYXQ15942 572 aaKnown RBP6.66□□□□□ -1.34
SNX6-204ENST00000555541 HLA-DQA1Q5Y7H0 255 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 PAQR3Q6TCH7 311 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 FCRL3Q96P31 734 aaPredicted RBP6.66□□□□□ -1.34
SNX6-204ENST00000555541 SPON2Q9BUD6 331 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 GP6Q9HCN6 339 aa6.66□□□□□ -1.34
SNX6-204ENST00000555541 TDRD10Q5VZ19 366 aaKnown RBP6.65□□□□□ -1.34
SNX6-204ENST00000555541 CCDC144CPQ8IYA2 1237 aa6.65□□□□□ -1.34
SNX6-204ENST00000555541 RBBP8NLQ8NC74 664 aaPredicted RBP6.65□□□□□ -1.34
SNX6-204ENST00000555541 NLGN2Q8NFZ4 835 aa6.65□□□□□ -1.34
SNX6-204ENST00000555541 SAMD11Q96NU1 681 aa6.65□□□□□ -1.34
SNX6-204ENST00000555541 CD247P20963 164 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 ACVRL1P37023 503 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 MC3RP41968 323 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 UNC5AQ6ZN44 842 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 BRF1Q92994 677 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 MENTQ9BUN1 341 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 DSCC1Q9BVC3 393 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 ZNF451Q9Y4E5 1061 aa6.64□□□□□ -1.35
SNX6-204ENST00000555541 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
SNX6-204ENST00000555541 RUFY4Q6ZNE9 571 aa6.63□□□□□ -1.35
SNX6-204ENST00000555541 B3GNT8Q7Z7M8 397 aa6.63□□□□□ -1.35
SNX6-204ENST00000555541 ZNF761Q86XN6 746 aaPredicted RBP6.63□□□□□ -1.35
SNX6-204ENST00000555541 SMARCC1Q92922 1105 aaPredicted RBP6.63□□□□□ -1.35
SNX6-204ENST00000555541 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
SNX6-204ENST00000555541 TM9SF2Q99805 663 aa6.63□□□□□ -1.35
SNX6-204ENST00000555541 SPATA6Q9NWH7 488 aaPredicted RBP6.63□□□□□ -1.35
SNX6-204ENST00000555541 FHOD1Q9Y613 1164 aa6.63□□□□□ -1.35
SNX6-204ENST00000555541 LTBP3Q9NS15 1303 aa6.62□□□□□ -1.35
SNX6-204ENST00000555541 ASGR2P07307 311 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms