RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
VRK1-203ENST00000555067 CWF19L1Q69YN2 538 aaKnown RBP8.58□□□□□ -1.04
VRK1-203ENST00000555067 AP5S1Q9NUS5 200 aa8.58□□□□□ -1.04
VRK1-203ENST00000555067 VAMP1P23763 118 aa8.57□□□□□ -1.04
VRK1-203ENST00000555067 KCNC1P48547 511 aa8.57□□□□□ -1.04
VRK1-203ENST00000555067 SLURP1P55000 103 aa8.57□□□□□ -1.04
VRK1-203ENST00000555067 TDRD10Q5VZ19 366 aaKnown RBP8.57□□□□□ -1.04
VRK1-203ENST00000555067 FBXW10Q5XX13 1052 aa8.57□□□□□ -1.04
VRK1-203ENST00000555067 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
VRK1-203ENST00000555067 SCAMP3O14828 347 aaKnown RBP8.56□□□□□ -1.04
VRK1-203ENST00000555067 PUM1Q14671 1186 aaKnown RBP eCLIP8.56□□□□□ -1.04
VRK1-203ENST00000555067 RAB3GAP1Q15042 981 aa8.56□□□□□ -1.04
VRK1-203ENST00000555067 RTP2Q5QGT7 225 aa8.56□□□□□ -1.04
VRK1-203ENST00000555067 PPFIBP1Q86W92 1011 aa8.56□□□□□ -1.04
VRK1-203ENST00000555067 SPATA32Q96LK8 384 aa8.56□□□□□ -1.04
VRK1-203ENST00000555067 ACSL6Q9UKU0 697 aa8.56□□□□□ -1.04
VRK1-203ENST00000555067 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
VRK1-203ENST00000555067 RECKO95980 971 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 PRKCAP17252 672 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 NCKAP1LP55160 1127 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 RACK1P63244 317 aaKnown RBP8.55□□□□□ -1.04
VRK1-203ENST00000555067 NOL9Q5SY16 702 aaKnown RBP8.55□□□□□ -1.04
VRK1-203ENST00000555067 DCAF15Q66K64 600 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 NAT16Q8N8M0 369 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 NUP43Q8NFH3 380 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 SRRTQ9BXP5 876 aaKnown RBP8.55□□□□□ -1.04
VRK1-203ENST00000555067 GP6Q9HCN6 339 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
VRK1-203ENST00000555067 CYP4F8P98187 520 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 AXDND1Q5T1B0 1012 aaPredicted RBP8.54□□□□□ -1.04
VRK1-203ENST00000555067 CYP2R1Q6VVX0 501 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 RPTNQ6XPR3 784 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 UNC5AQ6ZN44 842 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 LSRQ86X29 649 aaPredicted RBP8.54□□□□□ -1.04
VRK1-203ENST00000555067 ZNF654Q8IZM8 581 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 SLC12A9Q9BXP2 914 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
VRK1-203ENST00000555067 NUDT19A8MXV4 375 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 H0Y8X5 98 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 ITGA4P13612 1032 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 ZYXQ15942 572 aaKnown RBP8.53□□□□□ -1.04
VRK1-203ENST00000555067 VWA3BQ502W6 1294 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 HLA-DQA1Q5Y7H0 255 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 JMJD8Q96S16 334 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
VRK1-203ENST00000555067 GSTM1P09488 218 aa8.52□□□□□ -1.05
VRK1-203ENST00000555067 CD247P20963 164 aa8.52□□□□□ -1.05
VRK1-203ENST00000555067 NOP2P46087 812 aaKnown RBP8.52□□□□□ -1.05
VRK1-203ENST00000555067 ZNF445P59923 1031 aa8.52□□□□□ -1.05
VRK1-203ENST00000555067 TMEM52Q8NDY8 209 aa8.52□□□□□ -1.05
VRK1-203ENST00000555067 CRBNQ96SW2 442 aa8.52□□□□□ -1.05
VRK1-203ENST00000555067 ZNF214Q9UL59 606 aaPredicted RBP8.52□□□□□ -1.05
VRK1-203ENST00000555067 SF3B6Q9Y3B4 125 aaKnown RBP8.52□□□□□ -1.05
VRK1-203ENST00000555067 PAK2Q13177 524 aa8.51□□□□□ -1.05
VRK1-203ENST00000555067 PLEKHN1Q494U1 663 aaPredicted RBP8.51□□□□□ -1.05
VRK1-203ENST00000555067 RUFY4Q6ZNE9 571 aa8.51□□□□□ -1.05
VRK1-203ENST00000555067 NLGN1Q8N2Q7 840 aa8.51□□□□□ -1.05
VRK1-203ENST00000555067 FIBCD1Q8N539 461 aa8.51□□□□□ -1.05
VRK1-203ENST00000555067 GPR20Q99678 358 aa8.51□□□□□ -1.05
VRK1-203ENST00000555067 A0A087WZG4 1122 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 A0A1W2PQ27 194 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 A0A1W2PQ64 194 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 A0A1W2PQC6 194 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 A0A1W2PQD8 194 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 K7ESM1 405 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 FGF10O15520 208 aaPredicted RBP8.5□□□□□ -1.05
VRK1-203ENST00000555067 TP53P04637 393 aaPredicted RBP8.5□□□□□ -1.05
VRK1-203ENST00000555067 FBLN1P23142 703 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 LIMS1P48059 325 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 SOX9P48436 509 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 MAPKAPK2P49137 400 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 TCEAL1Q15170 157 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 JAMLQ86YT9 394 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 BRF1Q92994 677 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 GINM1Q9NU53 330 aa8.5□□□□□ -1.05
VRK1-203ENST00000555067 AKAP8O43823 692 aaKnown RBP8.49□□□□□ -1.05
VRK1-203ENST00000555067 PFKLP17858 780 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 TNFRSF1AP19438 455 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 POU4F1Q01851 419 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 NR1I3Q14994 352 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 UBXN11Q5T124 520 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 CCDC81Q6ZN84 652 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 C19orf47Q8N9M1 422 aaKnown RBP8.49□□□□□ -1.05
VRK1-203ENST00000555067 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 OR6P1Q8NGX9 317 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 RASGRP4Q8TDF6 673 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 FAM86C1Q9NVL1 165 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 ZNF451Q9Y4E5 1061 aa8.49□□□□□ -1.05
VRK1-203ENST00000555067 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
VRK1-203ENST00000555067 MSL3P1P0C860 447 aa8.48□□□□□ -1.05
VRK1-203ENST00000555067 EIF6P56537 245 aaKnown RBP8.48□□□□□ -1.05
VRK1-203ENST00000555067 ZC3H14Q6PJT7 736 aaKnown RBP8.48□□□□□ -1.05
VRK1-203ENST00000555067 LIPIQ6XZB0 460 aa8.48□□□□□ -1.05
VRK1-203ENST00000555067 METTL16Q86W50 562 aaKnown RBP8.48□□□□□ -1.05
VRK1-203ENST00000555067 FNIP1Q8TF40 1166 aa8.48□□□□□ -1.05
VRK1-203ENST00000555067 GPRASP2Q96D09 838 aa8.48□□□□□ -1.05
VRK1-203ENST00000555067 NOL6Q9H6R4 1146 aaKnown RBP8.48□□□□□ -1.05
VRK1-203ENST00000555067 PHAXQ9H814 394 aaKnown RBP8.48□□□□□ -1.05
VRK1-203ENST00000555067 WHRNQ9P202 907 aa8.48□□□□□ -1.05
VRK1-203ENST00000555067 EFR3BQ9Y2G0 817 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms