RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PPP2R3AQ06190 1150 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 GRAMD1CQ8IYS0 662 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 FGD5Q6ZNL6 1462 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 TOP2AP11388 1531 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 FLOT1O75955 427 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ABCB4P21439 1286 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 LBRQ14739 615 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 BTN2A1Q7KYR7 527 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 SLC17A8Q8NDX2 589 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 RRP36Q96EU6 259 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 EDEM3Q9BZQ6 932 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 AZI2Q9H6S1 392 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 STXBP4Q6ZWJ1 553 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 MIER2Q8N344 545 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ZWILCHQ9H900 591 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 AKT3Q9Y243 479 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 KIAA0100Q14667 2235 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 IQCA1LA6NCM1 817 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CYP2B6P20813 491 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 HS1BP3Q53T59 392 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 MIER3Q7Z3K6 550 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 KRT222Q8N1A0 295 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 SPON2Q9BUD6 331 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 FBXO2Q9UK22 296 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF215Q9UL58 517 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 A0A1B0GVL5 298 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CAPN1P07384 714 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 RFX8Q6ZV50 586 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 DEFB128Q7Z7B8 93 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 APPL2Q8NEU8 664 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 H3BRJ5 948 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 KRT14P02533 472 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CD58P19256 250 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 TRIM59Q8IWR1 403 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 PLIN5Q00G26 463 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 HIC1Q14526 733 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 DRC3Q9H069 523 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 MAP3K13O43283 966 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CDKL5O76039 1030 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 FAM47EQ6ZV65 393 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CDR2LQ86X02 465 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 MYOCQ99972 504 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ANO10Q9NW15 660 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 BAG5Q9UL15 447 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 PAXBP1Q9Y5B6 917 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 GADD45BO75293 160 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CLCN1P35523 988 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CCSAPQ6IQ19 270 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 KCTD1Q719H9 257 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 GFM2Q969S9 779 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 SPC25Q9HBM1 224 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 GDAQ9Y2T3 454 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF335Q9H4Z2 1342 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 SH3BGRLO75368 114 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ENDOD1O94919 500 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 HOXA13P31271 388 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 IFNL2Q8IZJ0 200 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 MAN1C1Q9NR34 630 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ARPP21Q9UBL0 812 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SLC13A4Q9UKG4 626 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PRRC2BQ5JSZ5 2229 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 TMEM232C9JQI7 657 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 EEF1B2P24534 225 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ARSJQ5FYB0 599 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 TNPO1Q92973 898 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ECHDC1Q9NTX5 307 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ADORA2BP29275 332 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 FBXO41Q8TF61 875 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 AP5M1Q9H0R1 490 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ZBTB17Q13105 803 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RAPH1Q70E73 1250 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 AFG1LQ8WV93 481 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RP1L1Q8IWN7 2480 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 MX1P20591 662 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RTN1Q16799 776 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 MAFFQ9ULX9 164 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 FANCD2Q9BXW9 1451 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 IGHDP01880 384 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CAPN2P17655 700 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PSMC1P62191 440 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 POM121L1PQ3SYA9 428 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KANSL1Q7Z3B3 1105 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RFX6Q8HWS3 928 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 NDOR1Q9UHB4 597 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SUPT6HQ7KZ85 1726 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 UBE4BO95155 1302 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KCNQ2O43526 872 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 VCAM1P19320 739 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CCDC152Q4G0S7 254 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ERMNQ8TAM6 284 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PNKPQ96T60 521 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 NAA15Q9BXJ9 866 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CSF1RP07333 972 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 GRK2P25098 689 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ORC1Q13415 861 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RCN2Q14257 317 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 NCLNQ969V3 563 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 LSM14BQ9BX40 385 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms