RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PHACTR4Q8IZ21 702 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 THEMISQ8N1K5 641 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 SYTL4Q96C24 671 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 C20orf173Q96LM9 149 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 TMEM74Q96NL1 305 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 ZNF552Q9H707 407 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 ZNF281Q9Y2X9 895 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 SPAG9O60271 1321 aaKnown RBP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 TMEM94Q12767 1356 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 FMN1Q68DA7 1419 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 ARHGAP23Q9P227 1491 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 SEMA7AO75326 666 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 NCLP19338 710 aaKnown RBP5.87□□□□□ -1.47
ATXN3-227ENST00000554491 CTSWP56202 376 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-227ENST00000554491 TAGLNQ01995 201 aaKnown RBP5.87□□□□□ -1.47
ATXN3-227ENST00000554491 CHRNEQ04844 493 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 DUSP4Q13115 394 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 DIEXFQ68CQ4 756 aaKnown RBP5.87□□□□□ -1.47
ATXN3-227ENST00000554491 TMEM132EQ6IEE7 984 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 DNAJC14Q6Y2X3 702 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-227ENST00000554491 ANKS4BQ8N8V4 417 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 CRELD1Q96HD1 420 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 PLEKHH2Q8IVE3 1493 aa5.87□□□□□ -1.47
ATXN3-227ENST00000554491 GPATCH8Q9UKJ3 1502 aaKnown RBP5.87□□□□□ -1.47
ATXN3-227ENST00000554491 CEP152O94986 1710 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 ERVK-7P63135 1459 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 CAMSAP2Q08AD1 1489 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 NCOA2Q15596 1464 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 FANCIQ9NVI1 1328 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 MINDY4BA8MYZ0 360 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 USP2O75604 605 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-227ENST00000554491 UBOX5O94941 541 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 RPL10P27635 214 aaKnown RBP5.86□□□□□ -1.47
ATXN3-227ENST00000554491 NMIQ13287 307 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-227ENST00000554491 SSPNQ14714 243 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 SNX17Q15036 470 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 REC114Q7Z4M0 266 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 FBXO33Q7Z6M2 555 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 USHBP1Q8N6Y0 703 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 GOLM1Q8NBJ4 401 aa5.86□□□□□ -1.47
ATXN3-227ENST00000554491 CNOT6Q9ULM6 557 aaKnown RBP5.86□□□□□ -1.47
ATXN3-227ENST00000554491 CCDC18Q5T9S5 1454 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 KIAA1107Q9UPP5 1409 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 PATL2C9JE40 543 aaKnown RBP5.85□□□□□ -1.47
ATXN3-227ENST00000554491 TLR3O15455 904 aaKnown RBP5.85□□□□□ -1.47
ATXN3-227ENST00000554491 IGSF3O75054 1194 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 CLSTN1O94985 981 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 BMP7P18075 431 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 GARTP22102 1010 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 GBP1P32455 592 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 SNAP47Q5SQN1 464 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 NLRX1Q86UT6 975 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 RELL1Q8IUW5 271 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 HDAC8Q9BY41 377 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 FOXP3Q9BZS1 431 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 PARD6AQ9NPB6 346 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 PIK3C2BO00750 1634 aa5.85□□□□□ -1.47
ATXN3-227ENST00000554491 EP400Q96L91 3159 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 MSH6P52701 1360 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 CFAP65Q6ZU64 1925 aaKnown RBP5.84□□□□□ -1.47
ATXN3-227ENST00000554491 TMEM82A0PJX8 343 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 RGS13O14921 159 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 SDHBP21912 280 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 SNW1Q13573 536 aaKnown RBP5.84□□□□□ -1.47
ATXN3-227ENST00000554491 MPP2Q14168 576 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 ARSHQ5FYA8 562 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 ADGRF1Q5T601 910 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 WAPLQ7Z5K2 1190 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 TMC3Q7Z5M5 1100 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
ATXN3-227ENST00000554491 SYTL5Q8TDW5 730 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-227ENST00000554491 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 ZMYM5Q9UJ78 669 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 KCTD3Q9Y597 815 aa5.84□□□□□ -1.47
ATXN3-227ENST00000554491 MAST1Q9Y2H9 1570 aa5.84□□□□□ -1.48
ATXN3-227ENST00000554491 AFF2P51816 1311 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 OR14I1A6ND48 311 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 SLC22A31A6NKX4 558 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 SORBS3O60504 671 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 ZPBP2Q6X784 338 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 RNF111Q6ZNA4 994 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 FAM196AQ6ZSG2 479 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 ENOX1Q8TC92 643 aaKnown RBP5.83□□□□□ -1.48
ATXN3-227ENST00000554491 PANK1Q8TE04 598 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 TCTN2Q96GX1 697 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 MAP6Q96JE9 813 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 ASCC2Q9H1I8 757 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-227ENST00000554491 ZCCHC4Q9H5U6 513 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 COPRSQ9NQ92 184 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 KBTBD4Q9NVX7 518 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 VTI1BQ9UEU0 232 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 CHD2O14647 1828 aaKnown RBP5.83□□□□□ -1.48
ATXN3-227ENST00000554491 ARHGAP35Q9NRY4 1499 aa5.83□□□□□ -1.48
ATXN3-227ENST00000554491 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-227ENST00000554491 MROH1Q8NDA8 1641 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms