RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.2
ACTN1-211ENST00000553882 EEF1GP26641 437 aaKnown RBP16.33■□□□□ 0.2
ACTN1-211ENST00000553882 LONRF2Q1L5Z9 754 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 NCAPH2Q6IBW4 605 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-211ENST00000553882 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 TBCKQ8TEA7 893 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 TRIM9Q9C026 710 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 CD209Q9NNX6 404 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
ACTN1-211ENST00000553882 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
ACTN1-211ENST00000553882 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-211ENST00000553882 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 OAS2P29728 719 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 ZNF507Q8TCN5 953 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 DUSP9Q99956 384 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 SPZ1Q9BXG8 430 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 NAV1Q8NEY1 1877 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 LAD1O00515 517 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 PRPHP41219 470 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 EIF6P56537 245 aaKnown RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 MFSD14BQ5SR56 506 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 NEK8Q86SG6 692 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 THAP9Q9H5L6 903 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 BTAF1O14981 1849 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 CCDC151A5D8V7 595 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 USP17L5A8MUK1 530 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 TXKP42681 527 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 CLEC10AQ8IUN9 316 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-211ENST00000553882 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
ACTN1-211ENST00000553882 VPS72Q15906 364 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 TSR1Q2NL82 804 aaKnown RBP16.31■□□□□ 0.2
ACTN1-211ENST00000553882 LZTS2Q9BRK4 669 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 MYL1P05976 194 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 ERCC3P19447 782 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 GNA11P29992 359 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 GYS2P54840 703 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 MCM6Q14566 821 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
ACTN1-211ENST00000553882 NEDD1Q8NHV4 660 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 P2RX5Q93086 422 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 CNOT6LQ96LI5 555 aaKnown RBP16.31■□□□□ 0.2
ACTN1-211ENST00000553882 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-211ENST00000553882 CAPN11Q9UMQ6 739 aa16.31■□□□□ 0.2
ACTN1-211ENST00000553882 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 ATP8B1O43520 1251 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 PICALMQ13492 652 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 NOA1Q8NC60 698 aaKnown RBP16.3■□□□□ 0.2
ACTN1-211ENST00000553882 COA7Q96BR5 231 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 AK8Q96MA6 479 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
ACTN1-211ENST00000553882 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 A0A1W2PQC6 194 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 MTIF2P46199 727 aaKnown RBP16.3■□□□□ 0.2
ACTN1-211ENST00000553882 DNM2P50570 870 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 HERVK_113P62684 666 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 GPIHBP1Q8IV16 184 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 LRRC47Q8N1G4 583 aaKnown RBP16.3■□□□□ 0.2
ACTN1-211ENST00000553882 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-211ENST00000553882 MYO6Q9UM54 1294 aa16.3■□□□□ 0.2
ACTN1-211ENST00000553882 MYH1P12882 1939 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 SRGNP10124 158 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 RHBDL3P58872 404 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 ST5P78524 1137 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 GGA1Q9UJY5 639 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 RASSF10A6NK89 507 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 F8W031 263 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-211ENST00000553882 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 CCNE1P24864 410 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 VSNL1P62760 191 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 BRD3Q15059 726 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 DYMQ7RTS9 669 aa16.29■□□□□ 0.2
ACTN1-211ENST00000553882 KIAA0895Q8NCT3 520 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms