RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
FCF1-204ENST00000553673 SPATS1Q496A3 300 aa6.59□□□□□ -1.35
FCF1-204ENST00000553673 TP53I13Q8NBR0 393 aaPredicted RBP6.59□□□□□ -1.35
FCF1-204ENST00000553673 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.59□□□□□ -1.35
FCF1-204ENST00000553673 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
FCF1-204ENST00000553673 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 SIGLEC6O43699 453 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 BUB1BO60566 1050 aaPredicted RBP6.58□□□□□ -1.36
FCF1-204ENST00000553673 FGRP09769 529 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 PLP2Q04941 152 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 LAPTM5Q13571 262 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
FCF1-204ENST00000553673 SHDQ96IW2 340 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 TANGO6Q9C0B7 1094 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 PRDM14Q9GZV8 571 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 ANTXR1Q9H6X2 564 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 SLC12A7Q9Y666 1083 aa6.58□□□□□ -1.36
FCF1-204ENST00000553673 ATP2B1P20020 1258 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 GUCY2CP25092 1073 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 POLR2BP30876 1174 aaKnown RBP6.57□□□□□ -1.36
FCF1-204ENST00000553673 CYP4F8P98187 520 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 ZXDCQ2QGD7 858 aaPredicted RBP6.57□□□□□ -1.36
FCF1-204ENST00000553673 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 MCF2L2Q86YR7 1114 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 C19orf47Q8N9M1 422 aaKnown RBP6.57□□□□□ -1.36
FCF1-204ENST00000553673 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 DHRS1Q96LJ7 313 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 TNFRSF12AQ9NP84 129 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 ERVK13-1Q9NX77 482 aa6.57□□□□□ -1.36
FCF1-204ENST00000553673 FFAR3O14843 346 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 RTP5Q14D33 572 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 TNNI3KQ59H18 835 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 RPTNQ6XPR3 784 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 ANAPC16Q96DE5 110 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 ZNF512BQ96KM6 892 aaPredicted RBP6.56□□□□□ -1.36
FCF1-204ENST00000553673 CDADC1Q9BWV3 514 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 CHST7Q9NS84 486 aa6.56□□□□□ -1.36
FCF1-204ENST00000553673 MEIS1O00470 390 aa6.55□□□□□ -1.36
FCF1-204ENST00000553673 PRICKLE3O43900 615 aaPredicted RBP6.55□□□□□ -1.36
FCF1-204ENST00000553673 LIMS1P48059 325 aa6.55□□□□□ -1.36
FCF1-204ENST00000553673 KCNC1P48547 511 aa6.55□□□□□ -1.36
FCF1-204ENST00000553673 CEBPAP49715 358 aaPredicted RBP6.55□□□□□ -1.36
FCF1-204ENST00000553673 CBX2Q14781 532 aaPredicted RBP6.55□□□□□ -1.36
FCF1-204ENST00000553673 PLEKHN1Q494U1 663 aaPredicted RBP6.55□□□□□ -1.36
FCF1-204ENST00000553673 SREK1Q8WXA9 508 aaKnown RBP6.55□□□□□ -1.36
FCF1-204ENST00000553673 ARMC5Q96C12 935 aa6.55□□□□□ -1.36
FCF1-204ENST00000553673 SLC9A7Q96T83 725 aa6.55□□□□□ -1.36
FCF1-204ENST00000553673 ACSL6Q9UKU0 697 aa6.55□□□□□ -1.36
FCF1-204ENST00000553673 A0A1W2PQ45 241 aaPredicted RBP6.54□□□□□ -1.36
FCF1-204ENST00000553673 A0A1W2PQY0 241 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 CLEC3AO75596 197 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 INSRRP14616 1297 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 ENDOUP21128 410 aaKnown RBP6.54□□□□□ -1.36
FCF1-204ENST00000553673 SLURP1P55000 103 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 CASP7P55210 303 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 ZNF200P98182 395 aaPredicted RBP6.54□□□□□ -1.36
FCF1-204ENST00000553673 IMPACTQ9P2X3 320 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 PRKAG3Q9UGI9 489 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
FCF1-204ENST00000553673 MRVI1Q9Y6F6 885 aa6.54□□□□□ -1.36
FCF1-204ENST00000553673 STK10O94804 968 aaKnown RBP6.53□□□□□ -1.36
FCF1-204ENST00000553673 ZNF205O95201 554 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 ACRP10323 421 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 IGFBP6P24592 240 aaPredicted RBP6.53□□□□□ -1.36
FCF1-204ENST00000553673 CTSKP43235 329 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 PUM1Q14671 1186 aaKnown RBP eCLIP6.53□□□□□ -1.36
FCF1-204ENST00000553673 PPP2R5EQ16537 467 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 RUFY4Q6ZNE9 571 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 ZNF408Q9H9D4 720 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 GFOD1Q9NXC2 390 aa6.53□□□□□ -1.36
FCF1-204ENST00000553673 IRS2Q9Y4H2 1338 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
FCF1-204ENST00000553673 PFKLP17858 780 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 BMP8BP34820 402 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 CAP1Q01518 475 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 ZC3H14Q6PJT7 736 aaKnown RBP6.52□□□□□ -1.37
FCF1-204ENST00000553673 HHIPL2Q6UWX4 724 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 UNC5AQ6ZN44 842 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 NLGN1Q8N2Q7 840 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 DRC1Q96MC2 740 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 JMJD8Q96S16 334 aa6.52□□□□□ -1.37
FCF1-204ENST00000553673 HIRIP3Q9BW71 556 aaPredicted RBP6.52□□□□□ -1.37
FCF1-204ENST00000553673 PHAXQ9H814 394 aaKnown RBP6.52□□□□□ -1.37
FCF1-204ENST00000553673 SUCOQ9UBS9 1254 aaKnown RBP6.52□□□□□ -1.37
FCF1-204ENST00000553673 PPP1R1BQ9UD71 204 aaPredicted RBP6.52□□□□□ -1.37
FCF1-204ENST00000553673 A0A1W2PQH9 124 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 ETFBP38117 255 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 MAPKAPK2P49137 400 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
FCF1-204ENST00000553673 CRTC3Q6UUV7 619 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 CKAP2LQ8IYA6 745 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 ADGRG2Q8IZP9 1017 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 FAM169BQ8N8A8 192 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 SMARCC1Q92922 1105 aaPredicted RBP6.51□□□□□ -1.37
FCF1-204ENST00000553673 MKRN2Q9H000 416 aaKnown RBP6.51□□□□□ -1.37
FCF1-204ENST00000553673 ACTR10Q9NZ32 417 aa6.51□□□□□ -1.37
FCF1-204ENST00000553673 K7ESM1 405 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms