RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 TMEM39AQ9NV64 488 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 ELP1O95163 1332 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 DCDC2CA8MYV0 355 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 CTAGE5O15320 804 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 ASGR1P07306 291 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 C6orf222P0C671 652 aaPredicted RBP14.68□□□□□ -0.06
SIX1-202ENST00000553535 HSPD1P10809 573 aaKnown RBP14.68□□□□□ -0.06
SIX1-202ENST00000553535 RAG1P15918 1043 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 EPHB4P54760 987 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 AAMPQ13685 434 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 MUM1L1Q5H9M0 696 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 CCDC174Q6PII3 467 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 ZNF589Q86UQ0 364 aaPredicted RBP14.68□□□□□ -0.06
SIX1-202ENST00000553535 SMC5Q8IY18 1101 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 DCAF4Q8WV16 495 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
SIX1-202ENST00000553535 ASB14A6NK59 587 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 NMIQ13287 307 aaPredicted RBP14.67□□□□□ -0.06
SIX1-202ENST00000553535 GNASQ5JWF2 1037 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 TTBK2Q6IQ55 1244 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 TMEM47Q9BQJ4 181 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 CYP39A1Q9NYL5 469 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 ASTN1O14525 1302 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 ZMYM6O95789 1325 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 UNC80Q8N2C7 3258 aa14.67□□□□□ -0.06
SIX1-202ENST00000553535 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.66□□□□□ -0.06
SIX1-202ENST00000553535 TOP1P11387 765 aaKnown RBP14.66□□□□□ -0.06
SIX1-202ENST00000553535 SMAD3P84022 425 aaKnown RBP14.66□□□□□ -0.06
SIX1-202ENST00000553535 TNFAIP2Q03169 654 aa14.66□□□□□ -0.06
SIX1-202ENST00000553535 FAM161BQ96MY7 647 aa14.66□□□□□ -0.06
SIX1-202ENST00000553535 RANBP17Q9H2T7 1088 aaKnown RBP14.66□□□□□ -0.06
SIX1-202ENST00000553535 TOMM22Q9NS69 142 aa14.66□□□□□ -0.06
SIX1-202ENST00000553535 TBX21Q9UL17 535 aa14.66□□□□□ -0.06
SIX1-202ENST00000553535 MTMR7Q9Y216 660 aa14.66□□□□□ -0.06
SIX1-202ENST00000553535 GNEQ9Y223 722 aaKnown RBP14.66□□□□□ -0.06
SIX1-202ENST00000553535 LCTP09848 1927 aa14.66□□□□□ -0.06
SIX1-202ENST00000553535 TRIM6-TRIM34B2RNG4 842 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 ARVCFO00192 962 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 DLL1O00548 723 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 TIMP1P01033 207 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 ICAM1P05362 532 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 SLC16A2P36021 539 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 FPGSQ05932 587 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 CCDC96Q2M329 555 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 RRP12Q5JTH9 1297 aaKnown RBP14.65□□□□□ -0.06
SIX1-202ENST00000553535 ZNF697Q5TEC3 545 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
SIX1-202ENST00000553535 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 RWDD1Q9H446 243 aaPredicted RBP14.65□□□□□ -0.06
SIX1-202ENST00000553535 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
SIX1-202ENST00000553535 DDX49Q9Y6V7 483 aaKnown RBP14.65□□□□□ -0.06
SIX1-202ENST00000553535 MROH7Q68CQ1 1323 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 IGHDP01880 384 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 HAND2P61296 217 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 SYDE2Q5VT97 1194 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 TAPT1Q6NXT6 567 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 PLEKHM2Q8IWE5 1019 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 MORC4Q8TE76 937 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 RILPL2Q969X0 211 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 VTI1AQ96AJ9 217 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 TTC14Q96N46 770 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 PURBQ96QR8 312 aaKnown RBP14.64□□□□□ -0.07
SIX1-202ENST00000553535 OSBPL3Q9H4L5 887 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 PDGFCQ9NRA1 345 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
SIX1-202ENST00000553535 PCP11498 1178 aaKnown RBP14.64□□□□□ -0.07
SIX1-202ENST00000553535 SMPD1P17405 629 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 SDSP20132 328 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 BEX3Q00994 111 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 NSMFQ6X4W1 530 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 RNPC3Q96LT9 517 aaKnown RBP14.64□□□□□ -0.07
SIX1-202ENST00000553535 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
SIX1-202ENST00000553535 EYSQ5T1H1 3165 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 CDH23Q9H251 3354 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 LRRC37A2A6NM11 1700 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 PDHBP11177 359 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 NUCB1Q02818 461 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 BAATQ14032 418 aaPredicted RBP14.63□□□□□ -0.07
SIX1-202ENST00000553535 MFSD5Q6N075 450 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 MFSD6Q6ZSS7 791 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 NOL8Q76FK4 1167 aaKnown RBP14.63□□□□□ -0.07
SIX1-202ENST00000553535 CHD1LQ86WJ1 897 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 FAM126BQ8IXS8 530 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 SLC43A3Q8NBI5 491 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 CDX2Q99626 313 aaPredicted RBP14.63□□□□□ -0.07
SIX1-202ENST00000553535 TTYH1Q9H313 450 aaPredicted RBP14.63□□□□□ -0.07
SIX1-202ENST00000553535 Q9Y3F1 56 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 PRUNE2Q8WUY3 3088 aa14.63□□□□□ -0.07
SIX1-202ENST00000553535 FRMPD2Q68DX3 1309 aaPredicted RBP14.62□□□□□ -0.07
SIX1-202ENST00000553535 MYO9BQ13459 2157 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 DYNC1LI2O43237 492 aaPredicted RBP14.62□□□□□ -0.07
SIX1-202ENST00000553535 CD4P01730 458 aa14.62□□□□□ -0.07
SIX1-202ENST00000553535 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms