RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 EGFL6Q8IUX8 553 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 HOMER2Q9NSB8 354 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
MMP19-209ENST00000552872 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 COL11A1P12107 1806 aaPredicted RBP11.64□□□□□ -0.55
MMP19-209ENST00000552872 PASKQ96RG2 1323 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 H3BQV1 296 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 STAT2P52630 851 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 CPLX2Q6PUV4 134 aaKnown RBP11.63□□□□□ -0.55
MMP19-209ENST00000552872 SAPCD2Q86UD0 394 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 ERO1BQ86YB8 467 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 C8orf76Q96K31 380 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 SMTNL1A8MU46 457 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 KIF28PB7ZC32 967 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 TOMM70O94826 608 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 NR5A1Q13285 461 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 CDC37Q16543 378 aaPredicted RBP11.63□□□□□ -0.55
MMP19-209ENST00000552872 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 ASPRV1Q53RT3 343 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 DCAF4Q8WV16 495 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 WDR18Q9BV38 432 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 FTOQ9C0B1 505 aaKnown RBP eCLIP11.63□□□□□ -0.55
MMP19-209ENST00000552872 R3HDMLQ9H3Y0 253 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 AS3MTQ9HBK9 375 aa11.63□□□□□ -0.55
MMP19-209ENST00000552872 NID2Q14112 1375 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 CDKL5O76039 1030 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 CYP2C8P10632 490 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 UBE2HP62256 183 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
MMP19-209ENST00000552872 MAP3K11Q16584 847 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 QRICH1Q2TAL8 776 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 SYDE2Q5VT97 1194 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 CYP4F22Q6NT55 531 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 POTEEQ6S8J3 1075 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 PGBD1Q96JS3 809 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
MMP19-209ENST00000552872 MTMR6Q9Y217 621 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
MMP19-209ENST00000552872 SCG2P13521 617 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 PPATQ06203 517 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 KRT40Q6A162 431 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 RRP36Q96EU6 259 aaKnown RBP11.62□□□□□ -0.55
MMP19-209ENST00000552872 FUCA2Q9BTY2 467 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 TMOD4Q9NZQ9 345 aa11.62□□□□□ -0.55
MMP19-209ENST00000552872 DEXIO95424 95 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 ATP2B1P20020 1258 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 PLS1Q14651 629 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 NAA30Q147X3 362 aaPredicted RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 EARS2Q5JPH6 523 aaKnown RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 GPATCH4Q5T3I0 446 aaKnown RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 UIMC1Q96RL1 719 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 RAVER2Q9HCJ3 691 aaKnown RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 SEC63Q9UGP8 760 aaKnown RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 RLFQ13129 1914 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 PARP14Q460N5 1801 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 BTBD18B2RXH4 712 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 MOGSQ13724 837 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 UBE2SQ16763 222 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 PFKFB3Q16875 520 aaPredicted RBP11.61□□□□□ -0.55
MMP19-209ENST00000552872 TBC1D5Q92609 795 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 RIOX1Q9H6W3 641 aa11.61□□□□□ -0.55
MMP19-209ENST00000552872 RCAN1P53805 252 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 PPIL2Q13356 520 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 SPC24Q8NBT2 197 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 PTPN18Q99952 460 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 SPZ1Q9BXG8 430 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 TMEM260Q9NX78 707 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 A0A0G2JLL6 359 aaPredicted RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 STXBP3O00186 592 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 WDR46O15213 610 aaKnown RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 AP5Z1O43299 807 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 AOC2O75106 756 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 HOXA13P31271 388 aaPredicted RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 USP14P54578 494 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 NAPAP54920 295 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 CCL15Q16663 113 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 SPRYD7Q5W111 196 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 PRRT2Q7Z6L0 340 aaPredicted RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 FBXO18Q8NFZ0 1043 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 BRI3BPQ8WY22 251 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 P2RX7Q99572 595 aaKnown RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 SLF1Q9BQI6 1058 aa11.6□□□□□ -0.55
MMP19-209ENST00000552872 TFIP11Q9UBB9 837 aaKnown RBP11.6□□□□□ -0.55
MMP19-209ENST00000552872 CNPY2Q9Y2B0 182 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms