RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 ERC1Q8IUD2 1116 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 ANKRD35Q8N283 1001 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 PRPF38AQ8NAV1 312 aaKnown RBP10.19□□□□□ -0.78
CDK4-213ENST00000552713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDK4-213ENST00000552713 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 AGBL1Q96MI9 1066 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 BOLA2Q9H3K6 86 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 SPC25Q9HBM1 224 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 C11orf16Q9NQ32 467 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
CDK4-213ENST00000552713 PCDHA11Q9Y5I1 949 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 MTCH2Q9Y6C9 303 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 SLC4A7Q9Y6M7 1214 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 SLC4A4Q9Y6R1 1079 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 ERC2O15083 957 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 CA3P07451 260 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 SMPD1P17405 629 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 NOL8Q76FK4 1167 aaKnown RBP10.18□□□□□ -0.78
CDK4-213ENST00000552713 FAM133AQ8N9E0 248 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 PUS7LQ9H0K6 701 aaKnown RBP10.18□□□□□ -0.78
CDK4-213ENST00000552713 MTIF3Q9H2K0 278 aaKnown RBP10.18□□□□□ -0.78
CDK4-213ENST00000552713 SLC38A10Q9HBR0 1119 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 PDGFCQ9NRA1 345 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 NYAP2Q9P242 653 aa10.18□□□□□ -0.78
CDK4-213ENST00000552713 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 FAM86C2PA6NEL3 165 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 DYNC1LI2O43237 492 aaPredicted RBP10.17□□□□□ -0.78
CDK4-213ENST00000552713 TLL1O43897 1013 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 ZBED4O75132 1171 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
CDK4-213ENST00000552713 FSCN1Q16658 493 aaKnown RBP10.17□□□□□ -0.78
CDK4-213ENST00000552713 EEPD1Q7L9B9 569 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 TLK2Q86UE8 772 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 FTSJ3Q8IY81 847 aaKnown RBP10.17□□□□□ -0.78
CDK4-213ENST00000552713 PPP1R13LQ8WUF5 828 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 CHMP4CQ96CF2 233 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
CDK4-213ENST00000552713 CD320Q9NPF0 282 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 CLIP2Q9UDT6 1046 aa10.17□□□□□ -0.78
CDK4-213ENST00000552713 ZNF536O15090 1300 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 IFIT2P09913 472 aaKnown RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 CYP2C9P11712 490 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 POU3F3P20264 500 aaPredicted RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 UBE3CQ15386 1083 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 TAPT1Q6NXT6 567 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 DEFB128Q7Z7B8 93 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 FBXO16Q8IX29 292 aaPredicted RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 SIRT2Q8IXJ6 389 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 LRRC47Q8N1G4 583 aaKnown RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 CLASRPQ8N2M8 674 aaKnown RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 CHST13Q8NET6 341 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 PANK1Q8TE04 598 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 A1CFQ9NQ94 594 aaKnown RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 TRMT13Q9NUP7 481 aaKnown RBP10.16□□□□□ -0.78
CDK4-213ENST00000552713 SIP14410 1827 aa10.16□□□□□ -0.78
CDK4-213ENST00000552713 XIRP2A4UGR9 3374 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 TRANK1O15050 2925 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 GSG1L2A8MUP6 293 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 PRDM1O75626 825 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 CABYRO75952 493 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 ATP5JP18859 108 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 SNAP25P60880 206 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 AAK1Q2M2I8 961 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 TMEM67Q5HYA8 995 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 TMEM31Q5JXX7 168 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 RPUSD2Q8IZ73 545 aaKnown RBP10.15□□□□□ -0.78
CDK4-213ENST00000552713 KIF1BPQ96EK5 621 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 CEP95Q96GE4 821 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 STRBPQ96SI9 672 aaKnown RBP10.15□□□□□ -0.78
CDK4-213ENST00000552713 HAUS7Q99871 368 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 ALDH8A1Q9H2A2 487 aaPredicted RBP10.15□□□□□ -0.78
CDK4-213ENST00000552713 FBXO40Q9UH90 709 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 FEM1BQ9UK73 627 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
CDK4-213ENST00000552713 MYO7AQ13402 2215 aa10.15□□□□□ -0.78
CDK4-213ENST00000552713 MYH7BA7E2Y1 1941 aa10.15□□□□□ -0.79
CDK4-213ENST00000552713 ATG2AQ2TAZ0 1938 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 LPXNO60711 386 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 OAZ1P54368 228 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 TAP1Q03518 808 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 GRB10Q13322 594 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 SBK1Q52WX2 424 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 HSP90AB4PQ58FF6 505 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 MUM1L1Q5H9M0 696 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 ARNTL2Q8WYA1 636 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 MKL1Q969V6 931 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDK4-213ENST00000552713 AP5M1Q9H0R1 490 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 ACAD9Q9H845 621 aa10.14□□□□□ -0.79
CDK4-213ENST00000552713 MKNK2Q9HBH9 465 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms