RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 DNAJC7Q99615 494 aa5.69□□□□□ -1.5
TSPAN8-205ENST00000550818 MBD1Q9UIS9 605 aaPredicted RBP5.69□□□□□ -1.5
TSPAN8-205ENST00000550818 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
TSPAN8-205ENST00000550818 MRPL42Q9Y6G3 142 aaKnown RBP5.69□□□□□ -1.5
TSPAN8-205ENST00000550818 C9IYK1 514 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 AKAP8O43823 692 aaKnown RBP5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 SUSD5O60279 629 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 CYP7A1P22680 504 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 VMACQ2NL98 169 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 TDRD10Q5VZ19 366 aaKnown RBP5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 EEPD1Q7L9B9 569 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 ZNF669Q96BR6 464 aaPredicted RBP5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 RNPC3Q96LT9 517 aaKnown RBP5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 Q96M66 194 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 ADAMTS20P59510 1910 aa5.68□□□□□ -1.5
TSPAN8-205ENST00000550818 TP53P04637 393 aaPredicted RBP5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 ETV3P41162 512 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 GALK1P51570 392 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 ZNF143P52747 638 aaPredicted RBP5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 EPHB3P54753 998 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 CHMP4BP1P59074 171 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 RNF4P78317 190 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 EGR3Q06889 387 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 MTERF2Q49AM1 385 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 NBPF12Q5TAG4 269 aaPredicted RBP5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 LILRB2Q8N423 598 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 VWCEQ96DN2 955 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 KREMEN1Q96MU8 473 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 EPN3Q9H201 632 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 EBF1Q9UH73 591 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 MYRFQ9Y2G1 1151 aa5.67□□□□□ -1.5
TSPAN8-205ENST00000550818 PLP2Q04941 152 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 SNX17Q15036 470 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 SLC10A6Q3KNW5 377 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 AXDND1Q5T1B0 1012 aaPredicted RBP5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 SP8Q8IXZ3 490 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 CCDC144CPQ8IYA2 1237 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 JMYQ8N9B5 988 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 RNF141Q8WVD5 230 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 ZNF512BQ96KM6 892 aaPredicted RBP5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 HAUS7Q99871 368 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 ASPNQ9BXN1 380 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 FAM86C1Q9NVL1 165 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 SUSD2Q9UGT4 822 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 GPR160Q9UJ42 338 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 ZMYM5Q9UJ78 669 aa5.66□□□□□ -1.5
TSPAN8-205ENST00000550818 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 ENPP3O14638 875 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 EPHX1P07099 455 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 NAT2P11245 290 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 SSRP1Q08945 709 aaKnown RBP5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 DCAF15Q66K64 600 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 HEATR6Q6AI08 1181 aaKnown RBP5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 FRMD5Q7Z6J6 570 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 SH3TC2Q8TF17 1288 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 BDH2Q9BUT1 245 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 MKRN2Q9H000 416 aaKnown RBP5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 KLHL25Q9H0H3 589 aa5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 LUC7LQ9NQ29 371 aaKnown RBP5.65□□□□□ -1.5
TSPAN8-205ENST00000550818 ANKRD34BA5PLL1 514 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 OR14I1A6ND48 311 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 NOTOA8MTQ0 251 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 CBFA2T2O43439 604 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 DIAPH1O60610 1272 aaKnown RBP5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 EFEMP2O95967 443 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 SRSF3P84103 164 aaKnown RBP5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 TCEAL1Q15170 157 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 HHIPL2Q6UWX4 724 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 C7orf61Q8IZ16 206 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 APBA2Q99767 749 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 TRIT1Q9H3H1 467 aaKnown RBP5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 CNTD2Q9H8S5 307 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 KANSL2Q9H9L4 492 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 PFDN2Q9UHV9 154 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 PCDHA11Q9Y5I1 949 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 KDM2BQ8NHM5 1336 aa5.64□□□□□ -1.51
TSPAN8-205ENST00000550818 IQCA1LA6NCM1 817 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 HRKO00198 91 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 IRS4O14654 1257 aaPredicted RBP5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 N4BP3O15049 544 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 SHOXO15266 292 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 PRICKLE3O43900 615 aaPredicted RBP5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 CD247P20963 164 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 HSD3B2P26439 372 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 AUHQ13825 339 aaKnown RBP5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 C2orf27AQ580R0 203 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 TSPYL5Q86VY4 417 aaPredicted RBP5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 SPPL2CQ8IUH8 684 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 ZNF513Q8N8E2 541 aaPredicted RBP5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 SGSM3Q96HU1 749 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 SPATA9Q9BWV2 254 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 GPATCH2Q9NW75 528 aa5.63□□□□□ -1.51
TSPAN8-205ENST00000550818 ESYT3A0FGR9 886 aa5.62□□□□□ -1.51
TSPAN8-205ENST00000550818 AGRPO00253 132 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms