RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 NAT16Q8N8M0 369 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 BRF1Q92994 677 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 DHRS1Q96LJ7 313 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 DSCC1Q9BVC3 393 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 ZNRF3Q9ULT6 936 aa4.74□□□□□ -1.65
CCNT1-203ENST00000550457 FGF10O15520 208 aaPredicted RBP4.73□□□□□ -1.65
CCNT1-203ENST00000550457 SRGAP3O43295 1099 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 CYBBP04839 570 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 ADRB1P08588 477 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 ERCC3P19447 782 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 ZYXQ15942 572 aaKnown RBP4.73□□□□□ -1.65
CCNT1-203ENST00000550457 HLA-DQA1Q5Y7H0 255 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 PAQR3Q6TCH7 311 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 FNIP1Q8TF40 1166 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 FCRL3Q96P31 734 aaPredicted RBP4.73□□□□□ -1.65
CCNT1-203ENST00000550457 BDH2Q9BUT1 245 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 GP6Q9HCN6 339 aa4.73□□□□□ -1.65
CCNT1-203ENST00000550457 A0A1W2PQ27 194 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 A0A1W2PQ64 194 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 A0A1W2PQC6 194 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 A0A1W2PQD8 194 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 PFKLP17858 780 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 TACR1P25103 407 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 KCNC1P48547 511 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 HTRA3P83110 453 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 PRR5P85299 388 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 FOXO4P98177 505 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 DLX2Q07687 328 aaPredicted RBP4.72□□□□□ -1.65
CCNT1-203ENST00000550457 TARBP2Q15633 366 aaKnown RBP4.72□□□□□ -1.65
CCNT1-203ENST00000550457 ANKRD39Q53RE8 183 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 CWF19L1Q69YN2 538 aaKnown RBP4.72□□□□□ -1.65
CCNT1-203ENST00000550457 BICRALQ6AI39 1079 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 LIPIQ6XZB0 460 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 LSRQ86X29 649 aaPredicted RBP4.72□□□□□ -1.65
CCNT1-203ENST00000550457 JAMLQ86YT9 394 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 KIAA0825Q8IV33 1275 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 SPON2Q9BUD6 331 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 PDLIM7Q9NR12 457 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 FAM86C1Q9NVL1 165 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 SUSD2Q9UGT4 822 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 FHOD1Q9Y613 1164 aa4.72□□□□□ -1.65
CCNT1-203ENST00000550457 WRNQ14191 1432 aaPredicted RBP eCLIP4.72□□□□□ -1.65
CCNT1-203ENST00000550457 F8W031 263 aaPredicted RBP4.71□□□□□ -1.66
CCNT1-203ENST00000550457 TP53P04637 393 aaPredicted RBP4.71□□□□□ -1.66
CCNT1-203ENST00000550457 PDIA4P13667 645 aaKnown RBP4.71□□□□□ -1.66
CCNT1-203ENST00000550457 IFNGR1P15260 489 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 MC3RP41968 323 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 PLP2Q04941 152 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 CCDC27Q2M243 656 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 ERICH6BQ5W0A0 696 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 CYP2R1Q6VVX0 501 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 SAPCD2Q86UD0 394 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 NLGN1Q8N2Q7 840 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 FIBCD1Q8N539 461 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 TAB3Q8N5C8 712 aaPredicted RBP4.71□□□□□ -1.66
CCNT1-203ENST00000550457 ZNF526Q8TF50 670 aaPredicted RBP4.71□□□□□ -1.66
CCNT1-203ENST00000550457 GIPC2Q8TF65 315 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 PTCHD1Q96NR3 888 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 SPATA25Q9BR10 227 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 ANP32EQ9BTT0 268 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 BCL2L13Q9BXK5 485 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 FBLN5Q9UBX5 448 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 ZNF451Q9Y4E5 1061 aa4.71□□□□□ -1.66
CCNT1-203ENST00000550457 ASGR2P07307 311 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 CD247P20963 164 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 SPATS1Q496A3 300 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 NOL9Q5SY16 702 aaKnown RBP4.7□□□□□ -1.66
CCNT1-203ENST00000550457 ZFYVE27Q5T4F4 411 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 UNC5AQ6ZN44 842 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 RUFY4Q6ZNE9 571 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 MCMBPQ9BTE3 642 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 BCAS3Q9H6U6 928 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 RXFP1Q9HBX9 757 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 PMF1-BGLAPU3KQ54 211 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 ABCC9O60706 1549 aa4.7□□□□□ -1.66
CCNT1-203ENST00000550457 SH3D21A4FU49 640 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 CBFA2T2O43439 604 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 CD3EP07766 207 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 GLI4P10075 376 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 NT5DC1Q5TFE4 455 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 FERMT3Q86UX7 667 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 NLGN2Q8NFZ4 835 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 SMARCC1Q92922 1105 aaPredicted RBP4.69□□□□□ -1.66
CCNT1-203ENST00000550457 ZDHHC15Q96MV8 337 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 TM9SF2Q99805 663 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 RNF38Q9H0F5 515 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 GZF1Q9H116 711 aaPredicted RBP4.69□□□□□ -1.66
CCNT1-203ENST00000550457 NOL6Q9H6R4 1146 aaKnown RBP4.69□□□□□ -1.66
CCNT1-203ENST00000550457 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 DUSP10Q9Y6W6 482 aa4.69□□□□□ -1.66
CCNT1-203ENST00000550457 A0A1W2PQJ5 194 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 PPP1R11O60927 126 aaPredicted RBP4.68□□□□□ -1.66
CCNT1-203ENST00000550457 IMPDH2P12268 514 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 PMLP29590 882 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 L1CAMP32004 1257 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 NOP2P46087 812 aaKnown RBP4.68□□□□□ -1.66
CCNT1-203ENST00000550457 CORO7P57737 925 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 HHIPL2Q6UWX4 724 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 B3GNT8Q7Z7M8 397 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 NOX5Q96PH1 765 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms