RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 BMP8BP34820 402 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 SNW1Q13573 536 aaKnown RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 CBX2Q14781 532 aaPredicted RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 HSP90AB2PQ58FF8 381 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 HEATR6Q6AI08 1181 aaKnown RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 THNSL2Q86YJ6 484 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 PRPF38AQ8NAV1 312 aaKnown RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 PDZD8Q8NEN9 1154 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 AARSD1Q9BTE6 412 aaKnown RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 ADAMTS10Q9H324 1103 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 SUSD2Q9UGT4 822 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 FBXL21Q9UKT6 434 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 MRPS23Q9Y3D9 190 aaKnown RBP5.87□□□□□ -1.47
CPNE8-206ENST00000549842 CARMIL2Q6F5E8 1435 aa5.87□□□□□ -1.47
CPNE8-206ENST00000549842 DNAJC25-GNG10A0A024R161 153 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 A0A087X0B3 334 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 IRS4O14654 1257 aaPredicted RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 KCNQ2O43526 872 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 TP53P04637 393 aaPredicted RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 EPHX1P07099 455 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 RAC2P15153 192 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 TXKP42681 527 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 PCBP3P57721 371 aaKnown RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 CT47A1Q5JQC4 288 aaPredicted RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 RALGPS1Q5JS13 557 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 FAM209AQ5JX71 171 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 AXDND1Q5T1B0 1012 aaPredicted RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 SPPL2CQ8IUH8 684 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 LINC01599Q8WXQ3 324 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 SYTL4Q96C24 671 aaPredicted RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 EXOC2Q96KP1 924 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 HAUS7Q99871 368 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 MRPL4Q9BYD3 311 aaKnown RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 ARHGEF4Q9NR80 690 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 G3BP2Q9UN86 482 aaKnown RBP5.86□□□□□ -1.47
CPNE8-206ENST00000549842 MAPRE3Q9UPY8 281 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 FHOD1Q9Y613 1164 aa5.86□□□□□ -1.47
CPNE8-206ENST00000549842 ALG1L2C9J202 215 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 PDE8AO60658 829 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 GSNP06396 782 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 FGFR1P11362 822 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 CD247P20963 164 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 PMLP29590 882 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 PPP2R2AP63151 447 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 NFKB2Q00653 900 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 EXOSC10Q01780 885 aaKnown RBP5.85□□□□□ -1.47
CPNE8-206ENST00000549842 CHRNEQ04844 493 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 DUSP4Q13115 394 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 ZSWIM9Q86XI8 627 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 JAMLQ86YT9 394 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 LILRA2Q8N149 483 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 OXR1Q8N573 874 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 FAM168AQ92567 244 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 KIRREL1Q96J84 757 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 IER2Q9BTL4 223 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 G6PC3Q9BUM1 346 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 KLHL25Q9H0H3 589 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 GBP3Q9H0R5 595 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 SP110Q9HB58 689 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 GP6Q9HCN6 339 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 INTS7Q9NVH2 962 aaKnown RBP5.85□□□□□ -1.47
CPNE8-206ENST00000549842 GFOD1Q9NXC2 390 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 FAM53CQ9NYF3 392 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 MCM8Q9UJA3 840 aa5.85□□□□□ -1.47
CPNE8-206ENST00000549842 DIS3Q9Y2L1 958 aaKnown RBP5.85□□□□□ -1.47
CPNE8-206ENST00000549842 ARID4BQ4LE39 1312 aaPredicted RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 FITM1A5D6W6 292 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 NOP56O00567 594 aaKnown RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 PPM1BO75688 479 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 ZNF205O95201 554 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 ITGAVP06756 1048 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 GLI1P08151 1106 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 CPEP16870 476 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 KIR2DL1P43626 348 aaPredicted RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 KIR2DL2P43627 348 aaPredicted RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 ZNF445P59923 1031 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 SUMO1P63165 101 aaKnown RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 SNX17Q15036 470 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 TDRD10Q5VZ19 366 aaKnown RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 NSMFQ6X4W1 530 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 ADAT2Q7Z6V5 191 aaKnown RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 DDX42Q86XP3 938 aaKnown RBP eCLIP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 ANKS4BQ8N8V4 417 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 JDP2Q8WYK2 163 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 PPP1R14AQ96A00 147 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 POLR3GLQ9BT43 218 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 FAM86C1Q9NVL1 165 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 WHRNQ9P202 907 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 MAGEC2Q9UBF1 373 aaPredicted RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 TCFL5Q9UL49 500 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 RNF114Q9Y508 228 aa5.84□□□□□ -1.47
CPNE8-206ENST00000549842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
CPNE8-206ENST00000549842 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
CPNE8-206ENST00000549842 TMEM82A0PJX8 343 aa5.83□□□□□ -1.48
CPNE8-206ENST00000549842 GSG1L2A8MUP6 293 aa5.83□□□□□ -1.48
CPNE8-206ENST00000549842 CBFA2T2O43439 604 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms