RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CNNM1Q9NRU3 951 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 TPCN1Q9ULQ1 816 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 PCDHGA10Q9Y5H3 936 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 IGSF9BQ9UPX0 1349 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 GAS2O43903 313 aaKnown RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 PDHBP11177 359 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 COL6A1P12109 1028 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 SOX11P35716 441 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 CDK8P49336 464 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 BCAMP50895 628 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 FAM187BQ17R55 369 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 SLC9A9Q8IVB4 645 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 DRC7Q8IY82 874 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 CCDC12Q8WUD4 166 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 ATP6V1DQ9Y5K8 247 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 KDM3AQ9Y4C1 1321 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 PNMA6FA0A0J9YX94 578 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 OPLAHO14841 1288 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 STBD1O95210 358 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 ITGBL1O95965 494 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 AK2P54819 239 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 RAD51AP2Q09MP3 1159 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 AXDND1Q5T1B0 1012 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 DHX38Q92620 1227 aaKnown RBP5.66□□□□□ -1.5
SCAF11-212ENST00000549162 TFCP2L1Q9NZI6 479 aa5.66□□□□□ -1.5
SCAF11-212ENST00000549162 KIAA0391O15091 583 aaKnown RBP5.65□□□□□ -1.5
SCAF11-212ENST00000549162 NRDCO43847 1150 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 RANBP6O60518 1105 aaKnown RBP5.65□□□□□ -1.5
SCAF11-212ENST00000549162 SLC25A27O95847 323 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 MBD3O95983 291 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 ICAM1P05362 532 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 SLC10A3P09131 477 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 KIF5BP33176 963 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 GJA5P36382 358 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 CXCL9Q07325 125 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 SCRN1Q12765 414 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 MORN1Q5T089 497 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 PCNX4Q63HM2 1172 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 CCDC148Q8NFR7 591 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 CHRDQ9H2X0 955 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 VCPKMTQ9H867 229 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 C17orf75Q9HAS0 396 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 UPF2Q9HAU5 1272 aaKnown RBP5.65□□□□□ -1.5
SCAF11-212ENST00000549162 PRDM16Q9HAZ2 1276 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 AS3MTQ9HBK9 375 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 DDX4Q9NQI0 724 aaKnown RBP5.65□□□□□ -1.5
SCAF11-212ENST00000549162 KCNG1Q9UIX4 513 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 SRPRBQ9Y5M8 271 aaKnown RBP5.65□□□□□ -1.5
SCAF11-212ENST00000549162 PLXND1Q9Y4D7 1925 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 ITIH6Q6UXX5 1313 aa5.65□□□□□ -1.5
SCAF11-212ENST00000549162 IGKV6-21A0A0C4DH24 114 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 PHF14O94880 888 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 KLRK1P26718 216 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 LONP1P36776 959 aaKnown RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 KIF23Q02241 960 aaPredicted RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 ALCAMQ13740 583 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 ME3Q16798 604 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 FIGNQ5HY92 759 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 TMEM92Q6UXU6 159 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 CATSPERGQ6ZRH7 1159 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 EPM2AIP1Q7L775 607 aaPredicted RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 LENG9Q96B70 501 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 TMEM121BQ9BXQ6 578 aaPredicted RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 SNCAIPQ9Y6H5 919 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 IGLV3-22A0A075B6J6 115 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 UFL1O94874 794 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 ANXA1P04083 346 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 HCLS1P14317 486 aaPredicted RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 PTPREP23469 700 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 BTDP43251 543 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 SLC39A14Q15043 492 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 RILPL1Q5EBL4 403 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 PRPF38BQ5VTL8 546 aaKnown RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 EXOC8Q8IYI6 725 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 DEPDC4Q8N2C3 294 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 PDCD7Q8N8D1 485 aaKnown RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 ETNPPLQ8TBG4 499 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF594Q96JF6 807 aaPredicted RBP5.65□□□□□ -1.51
SCAF11-212ENST00000549162 FAM20AQ96MK3 541 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 RIT2Q99578 217 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 FAM13BQ9NYF5 915 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 MYO6Q9UM54 1294 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 NCANO14594 1321 aa5.65□□□□□ -1.51
SCAF11-212ENST00000549162 IKBKBO14920 756 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 CMA1P23946 247 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 CDK17Q00537 523 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 CACNB1Q02641 598 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 PSMD2Q13200 908 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 SNX17Q15036 470 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 MAP3K21Q5TCX8 1036 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 BLOC1S2Q6QNY1 142 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 GPRASP2Q96D09 838 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 CEP295NLQ96MC4 621 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 NTPCRQ9BSD7 190 aaKnown RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 EDEM3Q9BZQ6 932 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 TUFT1Q9NNX1 390 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms