RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TMC4Q7Z404 712 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 LSRQ86X29 649 aaPredicted RBP4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 GOLM1Q8NBJ4 401 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 JMJD8Q96S16 334 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 SPATA25Q9BR10 227 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 LNPKQ9C0E8 428 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 MKRN2Q9H000 416 aaKnown RBP4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 ANTXR1Q9H6X2 564 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 PDLIM7Q9NR12 457 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 PARP2Q9UGN5 583 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 MATN3O15232 486 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 CNR2P34972 360 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 MVKQ03426 396 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 KIR3DS1Q14943 382 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 OVOS1Q6IE37 1185 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 NLRC3Q7RTR2 1065 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 B3GNT8Q7Z7M8 397 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 CARFQ8N187 725 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 PCDH18Q9HCL0 1135 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 NTMQ9P121 344 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 FBXL21Q9UKT6 434 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 PCDHB14Q9Y5E9 798 aa4.37□□□□□ -1.71
DEPDC4-204ENST00000547823 ZNF608Q9ULD9 1512 aaPredicted RBP4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 NOBOXO60393 691 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 PLA2G1BP04054 148 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 BICRALQ6AI39 1079 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 FERMT3Q86UX7 667 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 CABP7Q86V35 215 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 DHRS1Q96LJ7 313 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 SORCS2Q96PQ0 1159 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 DSCC1Q9BVC3 393 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 SRRTQ9BXP5 876 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 EHMT1Q9H9B1 1298 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 KCNQ5Q9NR82 932 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 AP5S1Q9NUS5 200 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 GFOD1Q9NXC2 390 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 DBR1Q9UK59 544 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 SUPT16HQ9Y5B9 1047 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 SYNJ2O15056 1496 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 FANCD2Q9BXW9 1451 aa4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 URB2Q14146 1524 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-204ENST00000547823 GDF5P43026 501 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 CTSKP43235 329 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 NOP2P46087 812 aaKnown RBP4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 TRIM26Q12899 539 aaPredicted RBP4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 AUHQ13825 339 aaKnown RBP4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 SLC9A5Q14940 896 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 CRTC3Q6UUV7 619 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 TTLL7Q6ZT98 887 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 REXO1Q8N1G1 1221 aaKnown RBP4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 NLGN2Q8NFZ4 835 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 CPA5Q8WXQ8 436 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 SMARCC1Q92922 1105 aaPredicted RBP4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 ATG4CQ96DT6 458 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 NUDT5Q9UKK9 219 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 SPATA31D1Q6ZQQ2 1576 aa4.35□□□□□ -1.71
DEPDC4-204ENST00000547823 MEIS3P2A8K0S8 358 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 MEIS1O00470 390 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 TNFRSF10CO14798 259 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 TBC1D8O95759 1140 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 PLATP00750 562 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 GSTM1P09488 218 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 CTSHP09668 335 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 ATF2P15336 505 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 ZNF20P17024 532 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 GARTP22102 1010 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 POLR2BP30876 1174 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 SARSP49591 514 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 CEBPAP49715 358 aaPredicted RBP4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 PRR5P85299 388 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 FAM160A1Q05DH4 1040 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 RTP2Q5QGT7 225 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 USP51Q70EK9 711 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 FAM124AQ86V42 546 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 SLC16A11Q8NCK7 471 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 ALG3Q92685 438 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 TSPAN17Q96FV3 270 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 RBM15Q96T37 977 aaKnown RBP eCLIP4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 BRMS1Q9HCU9 246 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 MRS2Q9HD23 443 aa4.34□□□□□ -1.71
DEPDC4-204ENST00000547823 EIF4G3O43432 1585 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 IFT140Q96RY7 1462 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 ANKRD33BA6NCL7 494 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 F8W031 263 aaPredicted RBP4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 CYR61O00622 381 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 SORBS3O60504 671 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 ASGR2P07307 311 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 NME1P15531 152 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 HMGA2P52926 109 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 DLX2Q07687 328 aaPredicted RBP4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 KIAA2012Q0VF49 1180 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 BORAQ6PGQ7 559 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 C7orf61Q8IZ16 206 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 TMEM52Q8NDY8 209 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 CHST13Q8NET6 341 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 FBXO27Q8NI29 283 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 ZNF526Q8TF50 670 aaPredicted RBP4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 DVL3Q92997 716 aaPredicted RBP4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 LOXL4Q96JB6 756 aa4.33□□□□□ -1.72
DEPDC4-204ENST00000547823 ZNF512BQ96KM6 892 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms