RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 FAM205CA6NFA0 338 aa15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 SNAP23O00161 211 aa15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 PRDM1O75626 825 aa15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 C4orf32Q8N8J7 132 aa15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 ZNHIT6Q9NWK9 470 aaKnown RBP15.34■□□□□ 0.05
SLC38A1-204ENST00000546893 CCDC194A0A1B0GVG4 234 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 ANKRD33BA6NCL7 494 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 NUTM2BA6NNL0 878 aaPredicted RBP15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 NUTM2EB1AL46 878 aaPredicted RBP15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 PSMD14O00487 310 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 RHOBTB3O94955 611 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 FXR1P51114 621 aaKnown RBP eCLIP15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 GSTO1P78417 241 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 CKAP4Q07065 602 aaKnown RBP15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 GRM4Q14833 912 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 MTF1Q14872 753 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 BEND6Q5SZJ8 279 aaPredicted RBP15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 WDR93Q6P2C0 686 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 CCDC170Q8IYT3 715 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 CAPN11Q9UMQ6 739 aa15.33■□□□□ 0.05
SLC38A1-204ENST00000546893 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 HIBADHP31937 336 aaKnown RBP15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 KRT9P35527 623 aa15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 CPLX3Q8WVH0 158 aa15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 RUBCNQ92622 972 aa15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 FAM107BQ9H098 131 aa15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 LUC7L2Q9Y383 392 aaKnown RBP15.33■□□□□ 0.04
SLC38A1-204ENST00000546893 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 MCM7P33993 719 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 CYLC1P35663 651 aaPredicted RBP15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 IRX1P78414 480 aaPredicted RBP15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 CDK17Q00537 523 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 AMPD3Q01432 767 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 MECOMQ03112 1051 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 UBXN1Q04323 297 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 NEDD9Q14511 834 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 FIGNQ5HY92 759 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 EPN1Q9Y6I3 576 aaPredicted RBP15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 NDUFA10O95299 355 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 IPO7O95373 1038 aaKnown RBP15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 PARP1P09874 1014 aaKnown RBP15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 UBA7P41226 1012 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 SLC35F6Q8N357 371 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 ITFG2Q969R8 447 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 KBTBD4Q9NVX7 518 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 MYO6Q9UM54 1294 aa15.32■□□□□ 0.04
SLC38A1-204ENST00000546893 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 CCDC88AQ3V6T2 1871 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 ANO9A1A5B4 782 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 M0R2N6 131 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 ERVK-24P63145 666 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 GIMAP8Q8ND71 665 aaPredicted RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 N4BP2L2Q92802 583 aaPredicted RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 TSGA10Q9BZW7 698 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 MYH13Q9UKX3 1938 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 A0A1W2PQJ5 194 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 TARSL2A2RTX5 802 aaKnown RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 KRT86O43790 486 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 CCT6AP40227 531 aaKnown RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 ARHGAP25P42331 645 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 ITPK1Q13572 414 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 MEA1Q16626 185 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 PTPN21Q16825 1174 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 BARGINQ6ZT62 677 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 NBPF5PQ86XG9 351 aaPredicted RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 TEX11Q8IYF3 940 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 VPS16Q9H269 839 aa15.31■□□□□ 0.04
SLC38A1-204ENST00000546893 ABCB11O95342 1321 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 hCG_1984214I3L0E3 225 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 GCFC2P16383 781 aaKnown RBP15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 ERCC3P19447 782 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 PRCPP42785 496 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 AMPD2Q01433 879 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 ERFEQ4G0M1 354 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 ZC3H12AQ5D1E8 599 aaKnown RBP15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 KRT25Q7Z3Z0 450 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 ZNF713Q8N859 430 aaPredicted RBP15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 ZNF507Q8TCN5 953 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 TATDN2Q93075 761 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 TAB2Q9NYJ8 693 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 L1RE1Q9UN81 338 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 BAZ2AQ9UIF9 1905 aaKnown RBP15.3■□□□□ 0.04
SLC38A1-204ENST00000546893 PHACTR2O75167 634 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms