RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CCDC171Q6TFL3 1326 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 TKFCQ3LXA3 575 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 RRP12Q5JTH9 1297 aaKnown RBP22.05■■□□□ 1.12
CHERP-204ENST00000546538 PPP4R3BQ5MIZ7 849 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 BTNL9Q6UXG8 535 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 PLEKHM2Q8IWE5 1019 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 DCAF4Q8WV16 495 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
CHERP-204ENST00000546538 PDGFCQ9NRA1 345 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 TCP11L1Q9NUJ3 509 aa22.05■■□□□ 1.12
CHERP-204ENST00000546538 GNEQ9Y223 722 aaKnown RBP22.05■■□□□ 1.12
CHERP-204ENST00000546538 FRMPD2Q68DX3 1309 aaPredicted RBP22.04■■□□□ 1.12
CHERP-204ENST00000546538 BEX3Q00994 111 aa22.04■■□□□ 1.12
CHERP-204ENST00000546538 CCDC96Q2M329 555 aa22.04■■□□□ 1.12
CHERP-204ENST00000546538 TICAM2Q86XR7 235 aa22.04■■□□□ 1.12
CHERP-204ENST00000546538 NUP133Q8WUM0 1156 aa22.04■■□□□ 1.12
CHERP-204ENST00000546538 TMEM39AQ9NV64 488 aa22.04■■□□□ 1.12
CHERP-204ENST00000546538 ELP1O95163 1332 aa22.03■■□□□ 1.12
CHERP-204ENST00000546538 ICAM1P05362 532 aa22.03■■□□□ 1.12
CHERP-204ENST00000546538 TOP1P11387 765 aaKnown RBP22.03■■□□□ 1.12
CHERP-204ENST00000546538 TAPT1Q6NXT6 567 aa22.03■■□□□ 1.12
CHERP-204ENST00000546538 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
CHERP-204ENST00000546538 TTYH1Q9H313 450 aaPredicted RBP22.03■■□□□ 1.12
CHERP-204ENST00000546538 TOMM22Q9NS69 142 aa22.03■■□□□ 1.12
CHERP-204ENST00000546538 CCPG1Q9ULG6 757 aa22.03■■□□□ 1.12
CHERP-204ENST00000546538 NEDD4P46934 1319 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 TRIM6-TRIM34B2RNG4 842 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 NFIBO00712 420 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 PDHBP11177 359 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 RAG1P15918 1043 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 SMPD1P17405 629 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 SDSP20132 328 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 GNASQ5JWF2 1037 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 CHD1LQ86WJ1 897 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 RILPL2Q969X0 211 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 OSBPL3Q9H4L5 887 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 GPCPD1Q9NPB8 672 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 CHD9Q3L8U1 2897 aa22.02■■□□□ 1.12
CHERP-204ENST00000546538 LAMA4Q16363 1823 aa22.02■■□□□ 1.11
CHERP-204ENST00000546538 SPTBN5Q9NRC6 3674 aaKnown RBP22.01■■□□□ 1.11
CHERP-204ENST00000546538 NUCB1Q02818 461 aa22.01■■□□□ 1.11
CHERP-204ENST00000546538 TNFAIP2Q03169 654 aa22.01■■□□□ 1.11
CHERP-204ENST00000546538 SYDE2Q5VT97 1194 aa22.01■■□□□ 1.11
CHERP-204ENST00000546538 FBXO16Q8IX29 292 aaPredicted RBP22.01■■□□□ 1.11
CHERP-204ENST00000546538 PCSK9Q8NBP7 692 aaKnown RBP22.01■■□□□ 1.11
CHERP-204ENST00000546538 MORC4Q8TE76 937 aa22.01■■□□□ 1.11
CHERP-204ENST00000546538 GLT1D1Q96MS3 346 aa22.01■■□□□ 1.11
CHERP-204ENST00000546538 GRIN2DO15399 1336 aa22.01■■□□□ 1.11
CHERP-204ENST00000546538 SNHG28P0DPA3 235 aa22■■□□□ 1.11
CHERP-204ENST00000546538 AKNAD1Q5T1N1 836 aa22■■□□□ 1.11
CHERP-204ENST00000546538 NSMFQ6X4W1 530 aa22■■□□□ 1.11
CHERP-204ENST00000546538 C16orf59Q7L2K0 433 aa22■■□□□ 1.11
CHERP-204ENST00000546538 EEPD1Q7L9B9 569 aa22■■□□□ 1.11
CHERP-204ENST00000546538 FAM126BQ8IXS8 530 aa22■■□□□ 1.11
CHERP-204ENST00000546538 CLEC4DQ8WXI8 215 aa22■■□□□ 1.11
CHERP-204ENST00000546538 ASB14A6NK59 587 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 DCDC2CA8MYV0 355 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 ARVCFO00192 962 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 TIMP1P01033 207 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 SMAD3P84022 425 aaKnown RBP21.99■■□□□ 1.11
CHERP-204ENST00000546538 FPGSQ05932 587 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 BAATQ14032 418 aaPredicted RBP21.99■■□□□ 1.11
CHERP-204ENST00000546538 CXCL17Q6UXB2 119 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 SEMA6BQ9H3T3 888 aa21.99■■□□□ 1.11
CHERP-204ENST00000546538 ZNF543Q08ER8 600 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 AAMPQ13685 434 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 ZNF697Q5TEC3 545 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 TLK2Q86UE8 772 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 SLC43A3Q8NBI5 491 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 RNPC3Q96LT9 517 aaKnown RBP21.98■■□□□ 1.11
CHERP-204ENST00000546538 ZKSCAN3Q9BRR0 538 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 IL25Q9H293 177 aa21.98■■□□□ 1.11
CHERP-204ENST00000546538 RWDD1Q9H446 243 aaPredicted RBP21.98■■□□□ 1.11
CHERP-204ENST00000546538 A0A0U1RQG5 324 aaPredicted RBP21.97■■□□□ 1.11
CHERP-204ENST00000546538 CD4P01730 458 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 SLC30A10Q6XR72 485 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 MFSD6Q6ZSS7 791 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 CDX2Q99626 313 aaPredicted RBP21.97■■□□□ 1.11
CHERP-204ENST00000546538 CPVLQ9H3G5 476 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 SPC25Q9HBM1 224 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 DLL1O00548 723 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 FSCN1Q16658 493 aaKnown RBP21.97■■□□□ 1.11
CHERP-204ENST00000546538 MFSD5Q6N075 450 aa21.97■■□□□ 1.11
CHERP-204ENST00000546538 CWC27Q6UX04 472 aaKnown RBP21.97■■□□□ 1.11
CHERP-204ENST00000546538 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.97■■□□□ 1.111e-9■□□□□ 10.1
CHERP-204ENST00000546538 DYNC1LI2O43237 492 aaPredicted RBP21.96■■□□□ 1.11
CHERP-204ENST00000546538 ALDH5A1P51649 535 aaPredicted RBP21.96■■□□□ 1.11
CHERP-204ENST00000546538 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
CHERP-204ENST00000546538 VTI1AQ96AJ9 217 aa21.96■■□□□ 1.11
CHERP-204ENST00000546538 TTC14Q96N46 770 aa21.96■■□□□ 1.11
CHERP-204ENST00000546538 MROH7Q68CQ1 1323 aa21.95■■□□□ 1.11
CHERP-204ENST00000546538 CHD7Q9P2D1 2997 aa21.95■■□□□ 1.1
CHERP-204ENST00000546538 GOLGA8HP0CJ92 632 aa21.95■■□□□ 1.1
CHERP-204ENST00000546538 PCP11498 1178 aaKnown RBP21.95■■□□□ 1.1
CHERP-204ENST00000546538 IQSEC1Q6DN90 963 aa21.95■■□□□ 1.1
CHERP-204ENST00000546538 PPP1R12CQ9BZL4 782 aa21.95■■□□□ 1.1
CHERP-204ENST00000546538 VTA1Q9NP79 307 aa21.95■■□□□ 1.1
CHERP-204ENST00000546538 UMODL1Q5DID0 1318 aa21.95■■□□□ 1.1
CHERP-204ENST00000546538 CSF2RAP15509 400 aa21.94■■□□□ 1.1
CHERP-204ENST00000546538 PSMC6P62333 389 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms