RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	EPN3	Q9H201	632 aa		5.75	□□□□□ -1.49
SNHG1-222	ENST00000545308	TMX1	Q9H3N1	280 aa		5.75	□□□□□ -1.49
SNHG1-222	ENST00000545308	FAM86C1	Q9NVL1	165 aa		5.75	□□□□□ -1.49
SNHG1-222	ENST00000545308	GPATCH2	Q9NW75	528 aa		5.75	□□□□□ -1.49
SNHG1-222	ENST00000545308	KLHL42	Q9P2K6	505 aa		5.75	□□□□□ -1.49
SNHG1-222	ENST00000545308	DUSP13	Q9UII6	198 aa		5.75	□□□□□ -1.49
SNHG1-222	ENST00000545308	NCAN	O14594	1321 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308		C9IYK1	514 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	RGS13	O14921	159 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	ZGLP1	P0C6A0	271 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	CCNF	P41002	786 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	PMS1	P54277	932 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	YARS	P54577	528 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	LINC00310	P59036	64 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	EGR3	Q06889	387 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	CBX2	Q14781	532 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	TDRD10	Q5VZ19	366 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	LRRC47	Q8N1G4	583 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	DTWD2	Q8NBA8	298 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	EXOC2	Q96KP1	924 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	SLC6A18	Q96N87	628 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	C19orf44	Q9H6X5	657 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	CWC22	Q9HCG8	908 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308	SCRIB	Q14160	1630 aa		5.74	□□□□□ -1.49
SNHG1-222	ENST00000545308		A0A1W2PQU0	124 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308		B8ZZF3	427 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	NUAK1	O60285	661 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	TP53	P04637	393 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	INHBB	P09529	407 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	L1CAM	P32004	1257 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	KRT26	Q7Z3Y9	468 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	IRF2BP1	Q8IU81	584 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	PHACTR4	Q8IZ21	702 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	LILRA2	Q8N149	483 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	OXR1	Q8N573	874 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	CYB5D2	Q8WUJ1	264 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	KISS1R	Q969F8	398 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	SGSM3	Q96HU1	749 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	ARHGEF4	Q9NR80	690 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	DDX56	Q9NY93	547 aa	Known RBP	5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	SUCO	Q9UBS9	1254 aa	Known RBP	5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	KCNH3	Q9ULD8	1083 aa		5.73	□□□□□ -1.49
SNHG1-222	ENST00000545308	FITM1	A5D6W6	292 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	IQCA1L	A6NCM1	817 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	POU3F3	P20264	500 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	NR0B2	Q15466	257 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	PLEKHG6	Q3KR16	790 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	SV2C	Q496J9	727 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	TM4SF20	Q53R12	229 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	FAM209A	Q5JX71	171 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	LCE5A	Q5TCM9	118 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	THNSL2	Q86YJ6	484 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	DHX37	Q8IY37	1157 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	NINJ1	Q92982	152 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	DHRS1	Q96LJ7	313 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	CCDC74B	Q96LY2	380 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	LGR4	Q9BXB1	951 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	MCOLN1	Q9GZU1	580 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	SLC6A17	Q9H1V8	727 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	METTL14	Q9HCE5	456 aa	Known RBP	5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308	PLAA	Q9Y263	795 aa		5.72	□□□□□ -1.49
SNHG1-222	ENST00000545308		A0A087X0B3	334 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	CBFA2T2	O43439	604 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	CAPNS1	P04632	268 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	EPHX1	P07099	455 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	LTK	P29376	864 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	ZNF143	P52747	638 aa	Predicted RBP	5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	BBS9	Q3SYG4	887 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	TIGD5	Q53EQ6	642 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	TAF7L	Q5H9L4	462 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	JAML	Q86YT9	394 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	NIM1K	Q8IY84	436 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	CLUHP3	Q96NS8	147 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	HAUS7	Q99871	368 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	KLHL25	Q9H0H3	589 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	APEX2	Q9UBZ4	518 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	PCDHA11	Q9Y5I1	949 aa		5.71	□□□□□ -1.5
SNHG1-222	ENST00000545308	ANKRD34B	A5PLL1	514 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	IRS4	O14654	1257 aa	Predicted RBP	5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	PEX10	O60683	326 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	RFPL3	O75679	317 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	ITGAV	P06756	1048 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	GBP1	P32455	592 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	DLG4	P78352	724 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	RNF141	Q8WVD5	230 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	MFSD3	Q96ES6	412 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	INTS4	Q96HW7	963 aa	Known RBP	5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	FGD4	Q96M96	766 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	APBA2	Q99767	749 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	DHRS4	Q9BTZ2	278 aa		5.7	□□□□□ -1.5
SNHG1-222	ENST00000545308	IRF2BPL	Q9H1B7	796 aa		5.7	□□□□□ -1.5

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