RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	CCPG1	Q9ULG6	757 aa		12.56	□□□□□ -0.4
ARAP1-215	ENST00000542264	SALL3	Q9BXA9	1300 aa		12.56	□□□□□ -0.4
ARAP1-215	ENST00000542264	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	LOC102724159	A0A0B4J2E5	919 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	MYADML2	A6NDP7	307 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	DYNC1LI2	O43237	492 aa	Predicted RBP	12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	NMT2	O60551	498 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	ICAM1	P05362	532 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	MFAP1	P55081	439 aa	Known RBP	12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	PWP2	Q15269	919 aa	Known RBP	12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	FSCN1	Q16658	493 aa	Known RBP	12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	VPS53	Q5VIR6	699 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	BTNL9	Q6UXG8	535 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	CHMP4C	Q96CF2	233 aa		12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	GNE	Q9Y223	722 aa	Known RBP	12.55	□□□□□ -0.4
ARAP1-215	ENST00000542264	CTAGE5	O15320	804 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	ADCY6	O43306	1168 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	NT5C2	P49902	561 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	CCDC96	Q2M329	555 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	NSMF	Q6X4W1	530 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	FAM126B	Q8IXS8	530 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	SLC43A3	Q8NBI5	491 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	TMEM47	Q9BQJ4	181 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	TTYH1	Q9H313	450 aa	Predicted RBP	12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	VTA1	Q9NP79	307 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	PRUNE2	Q8WUY3	3088 aa		12.54	□□□□□ -0.4
ARAP1-215	ENST00000542264	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	HSPD1	P10809	573 aa	Known RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	SNAP25	P60880	206 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	IRX5	P78411	483 aa	Predicted RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	ITGA7	Q13683	1181 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	BAAT	Q14032	418 aa	Predicted RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MUM1L1	Q5H9M0	696 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	RRP12	Q5JTH9	1297 aa	Known RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	SYDE2	Q5VT97	1194 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	CXCL17	Q6UXB2	119 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MFSD6	Q6ZSS7	791 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	KIAA1211	Q6ZU35	1233 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	TLK2	Q86UE8	772 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MAFA	Q8NHW3	353 aa	Predicted RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MORC4	Q8TE76	937 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	FAM227B	Q96M60	508 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MPHOSPH6	Q99547	160 aa	Known RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MTIF3	Q9H2K0	278 aa	Known RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	RANBP17	Q9H2T7	1088 aa	Known RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	RWDD1	Q9H446	243 aa	Predicted RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	RNF41	Q9H4P4	317 aa	Predicted RBP	12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	MTMR7	Q9Y216	660 aa		12.53	□□□□□ -0.4
ARAP1-215	ENST00000542264	TRIM6-TRIM34	B2RNG4	842 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264		B4DLN1	442 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	CD4	P01730	458 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	FOSL2	P15408	326 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	SMPD1	P17405	629 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	SLC16A2	P36021	539 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	MRPL12	P52815	198 aa	Known RBP	12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	BEX3	Q00994	111 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	BRDT	Q58F21	947 aa	Predicted RBP	12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	CCDC178	Q5BJE1	867 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	TMEM240	Q5SV17	173 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	AKNAD1	Q5T1N1	836 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	TAPT1	Q6NXT6	567 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	C16orf59	Q7L2K0	433 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	MYLIP	Q8WY64	445 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	CRBN	Q96SW2	442 aa		12.52	□□□□□ -0.41
ARAP1-215	ENST00000542264	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.52	□□□□□ -0.41	8e-23	■□□□□ 8.9
ARAP1-215	ENST00000542264	MYH8	P13535	1937 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	FGB	P02675	491 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	SUPT20HL2	P0C7V6	817 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	CSF2RA	P15509	400 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	DNAJB2	P25686	324 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	DUSP28	Q4G0W2	176 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	TTBK2	Q6IQ55	1244 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	ZNF365	Q70YC5	407 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	EEPD1	Q7L9B9	569 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	RPUSD2	Q8IZ73	545 aa	Known RBP	12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	RGS22	Q8NE09	1264 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	ESR2	Q92731	530 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	RILPL2	Q969X0	211 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	TIFA	Q96CG3	184 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	WDR11	Q9BZH6	1224 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	MAF1	Q9H063	256 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	HIPK3	Q9H422	1215 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	ZNF576	Q9H609	170 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	GPCPD1	Q9NPB8	672 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	IL23A	Q9NPF7	189 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	PDGFC	Q9NRA1	345 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	ASTN1	O14525	1302 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	ZMYM6	O95789	1325 aa		12.51	□□□□□ -0.41
ARAP1-215	ENST00000542264	GREB1L	Q9C091	1923 aa	Predicted RBP	12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264		A0A0D9SFI3	127 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	PTPDC1	A2A3K4	754 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	ZNF213	O14771	459 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	KPNA6	O60684	536 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	PDHB	P11177	359 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	CYP2C18	P33260	490 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	CPT1A	P50416	773 aa		12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	NMI	Q13287	307 aa	Predicted RBP	12.5	□□□□□ -0.41
ARAP1-215	ENST00000542264	GPATCH4	Q5T3I0	446 aa	Known RBP	12.5	□□□□□ -0.41

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