RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ELP1O95163 1332 aa31.91■■■□□ 2.7
CCM2-218ENST00000541586 PEX10O60683 326 aa31.9■■■□□ 2.7
CCM2-218ENST00000541586 TBC1D8O95759 1140 aa31.9■■■□□ 2.7
CCM2-218ENST00000541586 CRHR2Q13324 411 aa31.9■■■□□ 2.7
CCM2-218ENST00000541586 PAGR1Q9BTK6 254 aa31.9■■■□□ 2.7
CCM2-218ENST00000541586 BEGAINQ9BUH8 593 aa31.9■■■□□ 2.7
CCM2-218ENST00000541586 CTDP1Q9Y5B0 961 aaPredicted RBP31.9■■■□□ 2.7
CCM2-218ENST00000541586 CEBPZQ03701 1054 aaKnown RBP31.89■■■□□ 2.7
CCM2-218ENST00000541586 BTNL9Q6UXG8 535 aa31.89■■■□□ 2.7
CCM2-218ENST00000541586 NOSTRINQ8IVI9 506 aa31.89■■■□□ 2.7
CCM2-218ENST00000541586 ADGRF4Q8IZF3 695 aa31.89■■■□□ 2.7
CCM2-218ENST00000541586 GPKOWQ92917 476 aaPredicted RBP eCLIP31.89■■■□□ 2.7
CCM2-218ENST00000541586 RRP36Q96EU6 259 aaKnown RBP31.89■■■□□ 2.7
CCM2-218ENST00000541586 CA12O43570 354 aa31.89■■■□□ 2.69
CCM2-218ENST00000541586 PLA2G6O60733 806 aa31.89■■■□□ 2.69
CCM2-218ENST00000541586 OXER1Q8TDS5 423 aa31.89■■■□□ 2.69
CCM2-218ENST00000541586 SH3GLB2Q9NR46 395 aa31.89■■■□□ 2.69
CCM2-218ENST00000541586 NR5A1Q13285 461 aa31.88■■■□□ 2.69
CCM2-218ENST00000541586 R3HDMLQ9H3Y0 253 aa31.88■■■□□ 2.69
CCM2-218ENST00000541586 CPA4Q9UI42 421 aa31.88■■■□□ 2.69
CCM2-218ENST00000541586 VWA5AO00534 786 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 UBE2HP62256 183 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 NPY5RQ15761 445 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 WWC2Q6AWC2 1192 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 HOMER1Q86YM7 354 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 ANKRD13CQ8N6S4 541 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 PIGSQ96S52 555 aa31.87■■■□□ 2.69
CCM2-218ENST00000541586 MBD3O95983 291 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 KRT2P35908 639 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 SEC63Q9UGP8 760 aaKnown RBP31.86■■■□□ 2.69
CCM2-218ENST00000541586 ZBED4O75132 1171 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 NLRP5P59047 1200 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 PLS1Q14651 629 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 CCDC174Q6PII3 467 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 POTEEQ6S8J3 1075 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 HEATR3Q7Z4Q2 680 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 CPXCR1Q8N123 301 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 BARHL2Q9NY43 387 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 RTEL1Q9NZ71 1219 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 RCOR1Q9UKL0 485 aa31.86■■■□□ 2.69
CCM2-218ENST00000541586 TLR2O60603 784 aa31.85■■■□□ 2.69
CCM2-218ENST00000541586 TYW1BQ6NUM6 668 aa31.85■■■□□ 2.69
CCM2-218ENST00000541586 JMJD4Q9H9V9 463 aa31.85■■■□□ 2.69
CCM2-218ENST00000541586 BRMS1Q9HCU9 246 aa31.85■■■□□ 2.69
CCM2-218ENST00000541586 TXNRD2Q9NNW7 524 aa31.85■■■□□ 2.69
CCM2-218ENST00000541586 RBPJLQ9UBG7 517 aa31.85■■■□□ 2.69
CCM2-218ENST00000541586 MYPNQ86TC9 1320 aa31.84■■■□□ 2.69
CCM2-218ENST00000541586 STXBP3O00186 592 aa31.84■■■□□ 2.69
CCM2-218ENST00000541586 GCLCP48506 637 aaPredicted RBP31.83■■■□□ 2.69
CCM2-218ENST00000541586 LBX2Q6XYB7 198 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 GZF1Q9H116 711 aaPredicted RBP31.83■■■□□ 2.69
CCM2-218ENST00000541586 SLC38A10Q9HBR0 1119 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 POLR3EQ9NVU0 708 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 BTBD7Q9P203 1132 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 TSKSQ9UJT2 592 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 ADAMTS5Q9UNA0 930 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 CLIC4Q9Y696 253 aa31.83■■■□□ 2.69
CCM2-218ENST00000541586 ECM2O94769 699 aaPredicted RBP31.83■■■□□ 2.69
CCM2-218ENST00000541586 RAVER2Q9HCJ3 691 aaKnown RBP31.83■■■□□ 2.69
CCM2-218ENST00000541586 CALML3P27482 149 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 TMEM132BQ14DG7 1078 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 Q3C1V9 767 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 TPRNQ4KMQ1 711 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 CCDC148Q8NFR7 591 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 WBP1LQ9NX94 342 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 THSD7BQ9C0I4 1608 aa31.82■■■□□ 2.68
CCM2-218ENST00000541586 NASPP49321 788 aaPredicted RBP31.81■■■□□ 2.68
CCM2-218ENST00000541586 CDC37Q16543 378 aaPredicted RBP31.81■■■□□ 2.68
CCM2-218ENST00000541586 FAM177A1Q8N128 213 aaPredicted RBP31.81■■■□□ 2.68
CCM2-218ENST00000541586 MB21D1Q8N884 522 aa31.81■■■□□ 2.68
CCM2-218ENST00000541586 GTF3C2Q8WUA4 911 aaPredicted RBP31.81■■■□□ 2.68
CCM2-218ENST00000541586 RABGAP1Q9Y3P9 1069 aa31.81■■■□□ 2.68
CCM2-218ENST00000541586 RLFQ13129 1914 aa31.81■■■□□ 2.68
CCM2-218ENST00000541586 ANO1Q5XXA6 986 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 LINC00301Q8NCQ3 95 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 TNFRSF25Q93038 417 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 RANBP17Q9H2T7 1088 aaKnown RBP31.8■■■□□ 2.68
CCM2-218ENST00000541586 CNMDO75829 334 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 FDX1P10109 184 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 C17orf99Q6UX52 265 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 MTMR8Q96EF0 704 aa31.8■■■□□ 2.68
CCM2-218ENST00000541586 YEATS4O95619 227 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 ERVK-9P63128 1117 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 ERVK-24P63145 666 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 CAVIN1Q6NZI2 390 aaKnown RBP31.79■■■□□ 2.68
CCM2-218ENST00000541586 GPRC5AQ8NFJ5 357 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 PGBD1Q96JS3 809 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 AGBL1Q96MI9 1066 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 PCDHA4Q9UN74 947 aa31.79■■■□□ 2.68
CCM2-218ENST00000541586 PNMA6FA0A0J9YX94 578 aa31.78■■■□□ 2.68
CCM2-218ENST00000541586 hCG_1984214I3L0E3 225 aa31.78■■■□□ 2.68
CCM2-218ENST00000541586 ADAMTS3O15072 1205 aa31.78■■■□□ 2.68
CCM2-218ENST00000541586 NAPAP54920 295 aa31.78■■■□□ 2.68
CCM2-218ENST00000541586 QRICH1Q2TAL8 776 aa31.78■■■□□ 2.68
CCM2-218ENST00000541586 ZNF713Q8N859 430 aaPredicted RBP31.78■■■□□ 2.68
CCM2-218ENST00000541586 REPS2Q8NFH8 660 aa31.78■■■□□ 2.68
CCM2-218ENST00000541586 CCDC12Q8WUD4 166 aaPredicted RBP31.78■■■□□ 2.68
CCM2-218ENST00000541586 TAL1P17542 331 aaPredicted RBP31.78■■■□□ 2.68
CCM2-218ENST00000541586 TOB1P50616 345 aaPredicted RBP31.78■■■□□ 2.68
CCM2-218ENST00000541586 STK38Q15208 465 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms