RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 GZF1Q9H116 711 aaPredicted RBP7.91□□□□□ -1.14
SUDS3-202ENST00000541280 KCNQ5Q9NR82 932 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 THRAP3Q9Y2W1 955 aaKnown RBP7.91□□□□□ -1.14
SUDS3-202ENST00000541280 USP19O94966 1318 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 CPDO75976 1380 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 RALGAPBQ86X10 1494 aa7.91□□□□□ -1.14
SUDS3-202ENST00000541280 COL22A1Q8NFW1 1626 aaPredicted RBP7.91□□□□□ -1.14
SUDS3-202ENST00000541280 USP6P35125 1406 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 SPATA31A5Q5VU36 1347 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 SPATA31A7Q8IWB4 1347 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 GARTP22102 1010 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 GDNFP39905 211 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 AFMP43652 599 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 TMPRSS7Q7RTY8 843 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 KRT27Q7Z3Y8 459 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 UBE2FQ969M7 185 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 CCDC120Q96HB5 630 aa7.9□□□□□ -1.14
SUDS3-202ENST00000541280 SSH2Q76I76 1423 aa7.89□□□□□ -1.15
SUDS3-202ENST00000541280 KTN1Q86UP2 1357 aaKnown RBP7.89□□□□□ -1.15
SUDS3-202ENST00000541280 KIAA0232Q92628 1395 aa7.89□□□□□ -1.15
SUDS3-202ENST00000541280 PLCG1P19174 1290 aa7.89□□□□□ -1.15
SUDS3-202ENST00000541280 YARSP54577 528 aaKnown RBP7.89□□□□□ -1.15
SUDS3-202ENST00000541280 MPP2Q14168 576 aa7.89□□□□□ -1.15
SUDS3-202ENST00000541280 FAM13CQ8NE31 585 aa7.89□□□□□ -1.15
SUDS3-202ENST00000541280 SLC12A5Q9H2X9 1139 aa7.89□□□□□ -1.15
SUDS3-202ENST00000541280 POLR3KQ9Y2Y1 108 aaPredicted RBP7.89□□□□□ -1.15
SUDS3-202ENST00000541280 CPSF1Q10570 1443 aaKnown RBP7.88□□□□□ -1.15
SUDS3-202ENST00000541280 ZNF503-AS2A6NEH8 195 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.88□□□□□ -1.15
SUDS3-202ENST00000541280 F6X3S4 739 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 FARP2O94887 1054 aaPredicted RBP7.88□□□□□ -1.15
SUDS3-202ENST00000541280 ESR1P03372 595 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 SRFP11831 508 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 GBP2P32456 591 aaPredicted RBP7.88□□□□□ -1.15
SUDS3-202ENST00000541280 CHRNA2Q15822 529 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 KCNMB1Q16558 191 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 ARHGEF25Q86VW2 580 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 TCP11L2Q8N4U5 519 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 LRRC3Q9BY71 257 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 FAM53CQ9NYF3 392 aa7.88□□□□□ -1.15
SUDS3-202ENST00000541280 RGS12O14924 1447 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 AATKQ6ZMQ8 1374 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 SPATA31A1Q5TZJ5 1347 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 UPK3BL1B0FP48 263 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 UPK3BL2E5RIL1 263 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 JAG1P78504 1218 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
SUDS3-202ENST00000541280 GAB4Q2WGN9 574 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 RNF141Q8WVD5 230 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 DUSP15Q9H1R2 295 aaPredicted RBP7.87□□□□□ -1.15
SUDS3-202ENST00000541280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.87□□□□□ -1.15
SUDS3-202ENST00000541280 ZSWIM5Q9P217 1185 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 REV1Q9UBZ9 1251 aa7.87□□□□□ -1.15
SUDS3-202ENST00000541280 USP47Q96K76 1375 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 USP32Q8NFA0 1604 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 RBAK-RBAKDNI3L0D1 243 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 HTR3BO95264 441 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 MESP2Q0VG99 397 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 FZD5Q13467 585 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 SNAP47Q5SQN1 464 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 FYB2Q5VWT5 728 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 FAM196AQ6ZSG2 479 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.86□□□□□ -1.15
SUDS3-202ENST00000541280 DTWD2Q8NBA8 298 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 GOLM1Q8NBJ4 401 aa7.86□□□□□ -1.15
SUDS3-202ENST00000541280 BHLHE22Q8NFJ8 381 aaPredicted RBP7.86□□□□□ -1.15
SUDS3-202ENST00000541280 TRIT1Q9H3H1 467 aaKnown RBP7.86□□□□□ -1.15
SUDS3-202ENST00000541280 GLI1P08151 1106 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 FAM160A1Q05DH4 1040 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 ZNF648Q5T619 568 aaPredicted RBP7.85□□□□□ -1.15
SUDS3-202ENST00000541280 TOM1L2Q6ZVM7 507 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 COG3Q96JB2 828 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 KBTBD4Q9NVX7 518 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 ARHGEF28Q8N1W1 1705 aaKnown RBP7.85□□□□□ -1.15
SUDS3-202ENST00000541280 EDC4Q6P2E9 1401 aaKnown RBP7.85□□□□□ -1.15
SUDS3-202ENST00000541280 TRPM1Q7Z4N2 1603 aa7.85□□□□□ -1.15
SUDS3-202ENST00000541280 GREM1O60565 184 aa7.84□□□□□ -1.15
SUDS3-202ENST00000541280 ASPNQ9BXN1 380 aa7.84□□□□□ -1.15
SUDS3-202ENST00000541280 KCNH3Q9ULD8 1083 aa7.84□□□□□ -1.15
SUDS3-202ENST00000541280 BLMP54132 1417 aaPredicted RBP7.84□□□□□ -1.15
SUDS3-202ENST00000541280 ANKRD36BQ8N2N9 1353 aa7.84□□□□□ -1.16
SUDS3-202ENST00000541280 WDR17Q8IZU2 1322 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 ZBTB7CA1YPR0 619 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 LRRC10BA6NIK2 292 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 DNAJA2O60884 412 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 TSPYL5Q86VY4 417 aaPredicted RBP7.83□□□□□ -1.16
SUDS3-202ENST00000541280 NME9Q86XW9 330 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 CCDC74BQ96LY2 380 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 BCL2L13Q9BXK5 485 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 GPATCH2Q9NW75 528 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 USP35Q9P2H5 1018 aa7.83□□□□□ -1.16
SUDS3-202ENST00000541280 MINDY4BA8MYZ0 360 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 CHURC1-FNTBB4DL54 471 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 EXOC5O00471 708 aa7.82□□□□□ -1.16
SUDS3-202ENST00000541280 TPP2P29144 1249 aaPredicted RBP7.82□□□□□ -1.16
SUDS3-202ENST00000541280 FBXL19Q6PCT2 694 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms