RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CTNND1O60716 968 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 DTNBO60941 627 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 ASNSP08243 561 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 PARP1P09874 1014 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 EEF2P13639 858 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 PDCP20941 246 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 CDC27P30260 824 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 CAP2P40123 477 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 RCAN1P53805 252 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 HMGN5P82970 282 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 MAP3K10Q02779 954 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 SSRP1Q08945 709 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 TROAPQ12815 778 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 PRPF38BQ5VTL8 546 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 TRIM22Q8IYM9 498 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 C2orf69Q8N8R5 385 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 ZNF511Q8NB15 262 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 BAP1Q92560 729 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 ZBTB21Q9ULJ3 1066 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 FZD1Q9UP38 647 aa7.71□□□□□ -1.18
CLTCL1-206ENST00000540896 MYH1P12882 1939 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 UBE2Q2LH0YL09 131 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 H3BQV1 296 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 TRIM66O15016 1216 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 JAK2O60674 1132 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 USP2O75604 605 aaPredicted RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 CTHP32929 405 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 GNAQP50148 359 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 JAG1P78504 1218 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 NUCB2P80303 420 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 RRP1BQ14684 758 aaKnown RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 CCDC96Q2M329 555 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 SHROOM1Q2M3G4 852 aaPredicted RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 LARP1BQ659C4 914 aaKnown RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 ARMC9Q7Z3E5 817 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 NPAS3Q8IXF0 933 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 CMTR1Q8N1G2 835 aaKnown RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 NSUN7Q8NE18 718 aaKnown RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 PHKBQ93100 1093 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 MKL1Q969V6 931 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 WRNIP1Q96S55 665 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 MAP3K14Q99558 947 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 LZTS2Q9BRK4 669 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 SLC26A6Q9BXS9 759 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 SH2D4AQ9H788 454 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 GBA2Q9HCG7 927 aaPredicted RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 NYAP2Q9P242 653 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 ORC3Q9UBD5 711 aaPredicted RBP7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 FOCADQ5VW36 1801 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 PLIN4Q96Q06 1357 aa7.7□□□□□ -1.18
CLTCL1-206ENST00000540896 LAMB1P07942 1786 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 TRPM7Q96QT4 1865 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 SSC5DA1L4H1 1573 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 VPS37CA5D8V6 355 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 PHF20L1A8MW92 1017 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 KLRF2D3W0D1 207 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 CTDNEP1O95476 244 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 PDIA4P13667 645 aaKnown RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 INPP5BP32019 993 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 SLC1A4P43007 532 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 IREB2P48200 963 aaKnown RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 HUNKP57058 714 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 FKBP1BP68106 108 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 ST3GAL1Q11201 340 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 IKQ13123 557 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 GRM4Q14833 912 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 ZYXQ15942 572 aaKnown RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 TMEM132AQ24JP5 1023 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 FOXD4L5Q5VV16 416 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 SLFN13Q68D06 897 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 USP17L2Q6R6M4 530 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 MOB2Q70IA6 237 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 SMARCC2Q8TAQ2 1214 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 PIBF1Q8WXW3 757 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 WASF1Q92558 559 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 ZKSCAN4Q969J2 545 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 FEZ1Q99689 392 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 GOPCQ9HD26 462 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 ABT1Q9ULW3 272 aaKnown RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 CSADQ9Y600 493 aa7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 FRMPD2Q68DX3 1309 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 DDX60LQ5H9U9 1706 aaKnown RBP7.69□□□□□ -1.18
CLTCL1-206ENST00000540896 PALM3A6NDB9 673 aaPredicted RBP7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 F5H6K3 240 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 STX6O43752 255 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 PLEKHA8P1O95397 391 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 GOLGA8HP0CJ92 632 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 PDHBP11177 359 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 HSPA6P17066 643 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 IFNAR1P17181 557 aa7.68□□□□□ -1.18
CLTCL1-206ENST00000540896 XBP1P17861 261 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms