RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 FRMPD3Q5JV73 1810 aa7.13□□□□□ -1.27
CPSF7-219ENST00000539952 MYADML2A6NDP7 307 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 ASB14A6NK59 587 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 BCAR3O75815 825 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 FDX1P10109 184 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 ACTN1P12814 892 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 AKR1B1P15121 316 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 ATP2A2P16615 1042 aaKnown RBP7.12□□□□□ -1.27
CPSF7-219ENST00000539952 KCNQ1P51787 676 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 CCL23P55773 120 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 TNFAIP2Q03169 654 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 C12orf60Q5U649 245 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 IQSEC1Q6DN90 963 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 SNRNP48Q6IEG0 339 aaKnown RBP7.12□□□□□ -1.27
CPSF7-219ENST00000539952 NOL8Q76FK4 1167 aaKnown RBP7.12□□□□□ -1.27
CPSF7-219ENST00000539952 ERC1Q8IUD2 1116 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 MICALL1Q8N3F8 863 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 LENG1Q96BZ8 264 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-219ENST00000539952 DYNLL2Q96FJ2 89 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 NECAB3Q96P71 396 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-219ENST00000539952 SLF1Q9BQI6 1058 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 AP5M1Q9H0R1 490 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 PIEZO1Q92508 2521 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 SIPA1L1O43166 1804 aa7.12□□□□□ -1.27
CPSF7-219ENST00000539952 ZNF236Q9UL36 1845 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 ZNF532Q9HCE3 1301 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 ZBBXA8MT70 800 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 F5H6K3 240 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 SMIM22K7EJ46 135 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 DYNC1LI2O43237 492 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-219ENST00000539952 RAD21O60216 631 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 TRIM27P14373 513 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 PDE6AP16499 860 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 RABGGTBP53611 331 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 OAZ1P54368 228 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 KLRC3Q07444 240 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 HSP90AB4PQ58FF6 505 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 C16orf86Q6ZW13 317 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 ARMCX2Q7L311 632 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
CPSF7-219ENST00000539952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPSF7-219ENST00000539952 SDR42E1Q8WUS8 393 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 FRAT1Q92837 279 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-219ENST00000539952 NOC4LQ9BVI4 516 aaKnown RBP7.11□□□□□ -1.27
CPSF7-219ENST00000539952 NYAP2Q9P242 653 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 RIPK3Q9Y572 518 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
CPSF7-219ENST00000539952 MYH1P12882 1939 aa7.11□□□□□ -1.27
CPSF7-219ENST00000539952 PRR33A8MZF0 331 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 USP17L12C9JPN9 530 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 USP17L21D6R901 530 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CTAGE5O15320 804 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 ALADP13716 330 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 MYOGP15173 224 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 RFC2P35250 354 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 SLC4A3P48751 1232 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 BEX3Q00994 111 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 BECN1Q14457 450 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 AACSQ86V21 672 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CCDC144CPQ8IYA2 1237 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CPXCR1Q8N123 301 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 RETREG2Q8NC44 543 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 OXER1Q8TDS5 423 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 MKL1Q969V6 931 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 AGBL1Q96MI9 1066 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CRBNQ96SW2 442 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 SLC9A7Q96T83 725 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 TRPV6Q9H1D0 765 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 KCNH6Q9H252 994 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 SLC38A10Q9HBR0 1119 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 TLR7Q9NYK1 1049 aaKnown RBP7.1□□□□□ -1.27
CPSF7-219ENST00000539952 FEM1BQ9UK73 627 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 GNEQ9Y223 722 aaKnown RBP7.1□□□□□ -1.27
CPSF7-219ENST00000539952 PLXNA1Q9UIW2 1896 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 CACNA1GO43497 2377 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 EYSQ5T1H1 3165 aa7.1□□□□□ -1.27
CPSF7-219ENST00000539952 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 SPTBN5Q9NRC6 3674 aaKnown RBP7.09□□□□□ -1.27
CPSF7-219ENST00000539952 TCRBV5S4A2TA0A5A2 114 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 RFXAPO00287 272 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 ADCY6O43306 1168 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 B4GALT4O60513 344 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 CA3P07451 260 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 CYP2D6P10635 497 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 NFKBIBQ15653 356 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 FSCN1Q16658 493 aaKnown RBP7.09□□□□□ -1.27
CPSF7-219ENST00000539952 TKFCQ3LXA3 575 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 CLEC10AQ8IUN9 316 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 RPAP2Q8IXW5 612 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-219ENST00000539952 CLASRPQ8N2M8 674 aaKnown RBP7.09□□□□□ -1.27
CPSF7-219ENST00000539952 LCORLQ8N3X6 602 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 TMEM57Q8N5G2 664 aa7.09□□□□□ -1.27
CPSF7-219ENST00000539952 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.09□□□□□ -1.274e-7■■■□□ 16.7
CPSF7-219ENST00000539952 KATNBL1Q9H079 304 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms