RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 HOXB4P17483 251 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 HMGB2P26583 209 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 HUNKP57058 714 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 SAFB2Q14151 953 aaKnown RBP eCLIP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 SUZ12Q15022 739 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 FBXW10Q5XX13 1052 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 LRFN4Q6PJG9 635 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 LYPD4Q6UWN0 246 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 DMRTC2Q8IXT2 367 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 KLHL23Q8NBE8 558 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 RBBP8NLQ8NC74 664 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 MKL1Q969V6 931 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 SIRPGQ9P1W8 387 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 DEAF1O75398 565 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 LIG1P18858 919 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 ITGB8P26012 769 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 NLRP12P59046 1061 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 LSRQ86X29 649 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 CELF2-AS1Q8N7Q2 184 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 CRBNQ96SW2 442 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 KCNK4Q9NYG8 393 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 CORINQ9Y5Q5 1042 aa6.4□□□□□ -1.38
ECHDC1-223ENST00000534442 IMPDH2P12268 514 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 IL2RBP14784 551 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 NFE2L2Q16236 605 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 KIF4BQ2VIQ3 1234 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 SLC4A8Q2Y0W8 1093 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 FOXD4L6Q3SYB3 417 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 TNNI3KQ59H18 835 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 RGMBQ6NW40 437 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 FOXD4L3Q6VB84 417 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 JAZF1Q86VZ6 243 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 TTLL6Q8N841 843 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 OR6P1Q8NGX9 317 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 CDX2Q99626 313 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 USP26Q9BXU7 913 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 TRIM55Q9BYV6 548 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 TMA7Q9Y2S6 64 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 TRIM17Q9Y577 477 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 SNCAIPQ9Y6H5 919 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 CNTNAP4Q9C0A0 1308 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 PALLDQ8WX93 1383 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 MYOM3Q5VTT5 1437 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 YTHDC2Q9H6S0 1430 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 RGPD5Q99666 1765 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 ASH1LQ9NR48 2969 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 FER1L6Q2WGJ9 1857 aa6.39□□□□□ -1.39
ECHDC1-223ENST00000534442 FAM221BA6H8Z2 402 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 HTR3BO95264 441 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 CANXP27824 592 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 CD68P34810 354 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 GMPRP36959 345 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 PDE3AQ14432 1141 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 FAM109BQ6ICB4 259 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 TMEM132EQ6IEE7 984 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 RUFY4Q6ZNE9 571 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 MAP4K3Q8IVH8 894 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 TAOK3Q9H2K8 898 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 EPHX3Q9H6B9 360 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 RALYQ9UKM9 306 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 PCDHGC5Q9Y5F6 944 aa6.38□□□□□ -1.39
ECHDC1-223ENST00000534442 DLEC1Q9Y238 1755 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 MEIS3P2A8K0S8 358 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 FKTNO75072 461 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 AMPD1P23109 780 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 BMP8BP34820 402 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 DGKGP49619 791 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 CASP7P55210 303 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 RASA3Q14644 834 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 OTOP1Q7RTM1 612 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 HDXQ7Z353 690 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 SRPK1Q96SB4 655 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 GDF15Q99988 308 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 HTATIP2Q9BUP3 242 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 WDR18Q9BV38 432 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 GLIS2Q9BZE0 524 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 ACTR10Q9NZ32 417 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 R3HCC1Q9Y3T6 440 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-223ENST00000534442 CPSF1Q10570 1443 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 LTBP3Q9NS15 1303 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 FAM86C2PA6NEL3 165 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 DNAJA2O60884 412 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 GYS1P13807 737 aa6.36□□□□□ -1.39
ECHDC1-223ENST00000534442 RING1Q06587 406 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms