RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 HLA-CQ95604 372 aa14.82□□□□□ -0.04
SVIP-205ENST00000533774 SIP14410 1827 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 MBD4O95243 580 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 CYP2C9P11712 490 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 SMPD1P17405 629 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 FSCN1Q16658 493 aaKnown RBP14.81□□□□□ -0.04
SVIP-205ENST00000533774 DEFB128Q7Z7B8 93 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 RPUSD2Q8IZ73 545 aaKnown RBP14.81□□□□□ -0.04
SVIP-205ENST00000533774 PDGFCQ9NRA1 345 aa14.81□□□□□ -0.04
SVIP-205ENST00000533774 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
SVIP-205ENST00000533774 SOWAHBA6NEL2 793 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 GOLIM4O00461 696 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 CABYRO75952 493 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 NDUFB10O96000 172 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 MRE11P49959 708 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 ANKRD35Q8N283 1001 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 FAM133AQ8N9E0 248 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 ALDH8A1Q9H2A2 487 aaPredicted RBP14.8□□□□□ -0.04
SVIP-205ENST00000533774 TRMT13Q9NUP7 481 aaKnown RBP14.8□□□□□ -0.04
SVIP-205ENST00000533774 EXOC6BQ9Y2D4 811 aa14.8□□□□□ -0.04
SVIP-205ENST00000533774 F5H6K3 240 aa14.79□□□□□ -0.04
SVIP-205ENST00000533774 IPO8O15397 1037 aaKnown RBP14.79□□□□□ -0.04
SVIP-205ENST00000533774 DYNC1LI2O43237 492 aaPredicted RBP14.79□□□□□ -0.04
SVIP-205ENST00000533774 KLRC3Q07444 240 aa14.79□□□□□ -0.04
SVIP-205ENST00000533774 TTF1Q15361 905 aaPredicted RBP14.79□□□□□ -0.04
SVIP-205ENST00000533774 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
SVIP-205ENST00000533774 NOL8Q76FK4 1167 aaKnown RBP14.79□□□□□ -0.04
SVIP-205ENST00000533774 PRPF38AQ8NAV1 312 aaKnown RBP14.79□□□□□ -0.04
SVIP-205ENST00000533774 SLC38A10Q9HBR0 1119 aa14.79□□□□□ -0.04
SVIP-205ENST00000533774 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
SVIP-205ENST00000533774 ATP8A2Q9NTI2 1148 aa14.79□□□□□ -0.04
SVIP-205ENST00000533774 TRIOO75962 3097 aa14.78□□□□□ -0.04
SVIP-205ENST00000533774 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
SVIP-205ENST00000533774 TAPT1Q6NXT6 567 aa14.78□□□□□ -0.04
SVIP-205ENST00000533774 PPP1R13LQ8WUF5 828 aa14.78□□□□□ -0.04
SVIP-205ENST00000533774 KIFC2Q96AC6 838 aa14.78□□□□□ -0.04
SVIP-205ENST00000533774 DNAJC2Q99543 621 aaKnown RBP14.78□□□□□ -0.04
SVIP-205ENST00000533774 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
SVIP-205ENST00000533774 LCHNA4D1U4 455 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 PRR33A8MZF0 331 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 ZBED4O75132 1171 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 RASA1P20936 1047 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 ADD2P35612 726 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 HERC6Q8IVU3 1022 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 CHST13Q8NET6 341 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 GDPD5Q8WTR4 605 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 NYAP2Q9P242 653 aa14.77□□□□□ -0.05
SVIP-205ENST00000533774 ATG2AQ2TAZ0 1938 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 MYO7AQ13402 2215 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 PFKMP08237 780 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 NHLH1Q02575 133 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 EEPD1Q7L9B9 569 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 TMCO2Q7Z6W1 182 aaPredicted RBP14.76□□□□□ -0.05
SVIP-205ENST00000533774 FBXO16Q8IX29 292 aaPredicted RBP14.76□□□□□ -0.05
SVIP-205ENST00000533774 FAM178BQ8IXR5 827 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 STK11IPQ8N1F8 1099 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 SNX27Q96L92 541 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 SLC9A7Q96T83 725 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 AP5M1Q9H0R1 490 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 A1CFQ9NQ94 594 aaKnown RBP14.76□□□□□ -0.05
SVIP-205ENST00000533774 FBXO40Q9UH90 709 aa14.76□□□□□ -0.05
SVIP-205ENST00000533774 ZNF536O15090 1300 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 TNKSO95271 1327 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.75□□□□□ -0.05
SVIP-205ENST00000533774 IGKV6D-41A0A0C4DH26 115 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 RLBP1P12271 317 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.75□□□□□ -0.05
SVIP-205ENST00000533774 ANKS1AQ92625 1134 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
SVIP-205ENST00000533774 SEZ6LQ9BYH1 1024 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 CLIP2Q9UDT6 1046 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 C5orf42Q9H799 3197 aa14.75□□□□□ -0.05
SVIP-205ENST00000533774 IL9P15248 144 aa14.74□□□□□ -0.05
SVIP-205ENST00000533774 GJD3Q8N144 294 aa14.74□□□□□ -0.05
SVIP-205ENST00000533774 PHOSPHO2Q8TCD6 241 aa14.74□□□□□ -0.05
SVIP-205ENST00000533774 RHPN1Q8TCX5 695 aa14.74□□□□□ -0.05
SVIP-205ENST00000533774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.74□□□□□ -0.05
SVIP-205ENST00000533774 UBE2ZQ9H832 354 aaPredicted RBP14.74□□□□□ -0.05
SVIP-205ENST00000533774 SLC4A4Q9Y6R1 1079 aa14.74□□□□□ -0.05
SVIP-205ENST00000533774 ASB14A6NK59 587 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 ZEB2O60315 1214 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 IQCF3P0C7M6 154 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 OAZ1P54368 228 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 PURAQ00577 322 aaKnown RBP14.73□□□□□ -0.05
SVIP-205ENST00000533774 GPNMBQ14956 572 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 IQSEC1Q6DN90 963 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 UIMC1Q96RL1 719 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 PUS7LQ9H0K6 701 aaKnown RBP14.73□□□□□ -0.05
SVIP-205ENST00000533774 ACAD9Q9H845 621 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 RNF146Q9NTX7 359 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 FEM1BQ9UK73 627 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 Q9Y3F1 56 aa14.73□□□□□ -0.05
SVIP-205ENST00000533774 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
SVIP-205ENST00000533774 ACTN1P12814 892 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms